Rhodococcus oxybenzonivorans: CBI38_12255
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Entry
CBI38_12255 CDS
T08279
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz03030
DNA replication
roz03430
Mismatch repair
roz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBI38_12255
03430 Mismatch repair
CBI38_12255
03440 Homologous recombination
CBI38_12255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roz03032
]
CBI38_12255
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_12255
Enzymes [BR:
roz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBI38_12255
DNA replication proteins [BR:
roz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBI38_12255
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBI38_12255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWK72233
UniProt:
A0A2S2BUF9
LinkDB
All DBs
Position
complement(2579290..2581050)
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AA seq
586 aa
AA seq
DB search
MQPEFEQLRFDELDTPLRDTTFVIVDLETTGGRPGEDAITEIGAVKVRGGEVLGEMATLV
DPGRSIPPHIVEITGITTAMVVDAPRIERVLPAFLEFARGSVLVAHNAPFDTGFLKAAAA
ATDTPWPKFTVLCTVKLARRVLTRDEAPSVKLSSLARLFDVSTQPTHRALDDARATVDVL
HALIDRVGNQGVHSLTELVDYLPDVSSHQRAKRTLASHLPHAPGVYLFRGPSDEVLYVGT
ATDLRRRVRNYFTGSETRGRMKEMVALTTRIDHVECSHALEAGVRELRLLAAHTPPYNRR
SKYPKRGWWITLTVEAFPRLSVVRTPTPDSLGPFRSRSTAVEVAETLAEYCVLRTCTTRI
PKGREHGPQCPPRELARCPAAVQGLKSEDDYSPGPRLFRHLLRGVDDTPLRRMRTRLDAL
AASELFENAARLRDRTADVALALRRMQRLAALTALDEIVAARPAATGGWEFAVIRHGRLA
SSGRARRGVHPMPVVEALVLAAETVVPDDAPLRGASPEEAGLLARWLDSEGTRIVSASAG
YCEPARGAGSWAEWCERARAGSEPTPEPESRAPVPDAVPHHIGWHS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaccggagttcgagcaactgaggttcgacgagctcgacaccccgctgcgagatacc
accttcgtgatcgtcgatctcgaaacgaccggtggacggcccggggaggacgcgatcacc
gagatcggcgccgtgaaggtgcgcggcggcgaagtactcggtgagatggccaccctcgtg
gatccgggtcgctccatcccgccgcacatcgtggagatcaccggaatcaccacggcgatg
gtcgtggacgccccgcgtatcgagcgggtactgcccgcctttctggaattcgcacgcggc
tcggtgctggttgcgcacaacgctcccttcgacaccggtttcctcaaggccgccgcggcg
gccaccgacaccccctggcccaagttcacggtgctgtgcacggtcaagctggcgcgccgc
gtcctcacccgcgacgaagcaccgtcggtgaagctgtcctcccttgcccggctcttcgac
gtcagcacacagcccactcaccgcgcactcgacgacgcccgcgccaccgtcgacgtcctg
cacgctctgatcgatcgggtcggcaaccagggagtgcacagtctcaccgaactcgtcgat
taccttcccgacgtttcctcccaccagcgagccaagcgcaccctcgccagtcacctaccg
cacgcccccggggtgtacctgttccgtggcccctcggacgaggtgctctacgtcggaacg
gcgacagatctgcggcgccgggtacgcaattacttcaccgggtccgagacgcgcggacgg
atgaaggagatggtggcgctcaccacgcggatcgatcatgtggagtgctcgcacgcgctc
gaggccggtgtccgtgaactgcgcctactcgccgcacacacgccgccgtacaaccggcgg
tcgaagtatccgaagcgcggatggtggatcacactcacagtcgaggcctttccccgactg
tccgtcgtacgcactcccactccggattcactcggcccgttccgctcccgctccaccgcg
gtcgaggtcgcagagacgctcgccgagtactgcgtcttgcgcacctgcaccacccggata
ccgaaaggacgcgaacatggaccgcaatgtccgccgcgcgaactcgcccggtgccctgcg
gccgtgcagggtctgaaatccgaggacgactacagccccggcccccgactctttcgtcac
ctgctgcgaggcgtcgacgacacgccactgcggcggatgcgcacacggctggacgcgcta
gcggcgagcgagctgttcgagaacgccgcccggctgcgcgaccgcactgccgacgtcgcc
ctcgcattgcgcaggatgcaacggctggctgccctcaccgcgctcgacgagatcgtggcg
gcccgcccggccgccaccggaggttgggagttcgccgtgatccggcacggccggctcgca
tcctccgggcgtgcgcggcgcggagtacacccgatgccggtggtcgaggctctggtgctc
gctgcagagaccgtcgttccggatgatgcgccgctccgcggggcctcgcccgaggaagcc
ggtctgctggcccgctggctcgatagcgagggcacccgcatagtcagcgcctccgcggga
tactgcgaacccgcgcggggggccggatcgtgggcggagtggtgcgagcgggcccgcgcc
ggcagtgaaccgacacccgaaccggagtcccgagcgcctgtgcccgacgctgttccccac
cacatagggtggcactcatga
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