Rhodococcus oxybenzonivorans: CBI38_12435
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Entry
CBI38_12435 CDS
T08279
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz00470
D-Amino acid metabolism
roz00550
Peptidoglycan biosynthesis
roz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBI38_12435
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBI38_12435
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
roz01011
]
CBI38_12435
Enzymes [BR:
roz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CBI38_12435
Peptidoglycan biosynthesis and degradation proteins [BR:
roz01011
]
Precursor biosynthesis
Amino acid ligase
CBI38_12435
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
2-Hacid_dh_C
NAD_binding_7
XdhC_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AWK72261
UniProt:
A0A2S2BUF0
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Position
2620641..2622137
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AA seq
498 aa
AA seq
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MAEDLELDRLRGRAVLVAGAGISGRATIEPLRELGALVTVTDSNADALAECARLGAATVP
IDDLLADRERVRDFALVVTSPGFRPDAPLLSAAAGDGIPIWGDIELSWHVDRSGLYGPPR
RWLVVTGTNGKTTTTSMLQSILSAAKVPSAACGNIGLPVLEALRQTSPRPEVLAVELSSF
QLHWAPSVRPAAGAVLNIAEDHLDWHGGMQSYIDAKARALTGNVAVLGLDDDVAASLASS
SPAERTVGFRVGIPGPGELGIENGHLVDRAFADGLRLAPAEGITPSGPAGLMDALAAAAL
ARAAGVGPEAVARGLASYVVGPHRGARVAEIGGVTFVDDSKATNPHAAGPSILAHQRVVW
IAGGLLKGAQVDDLIVEVADRLTGVVLLGRDATHIAESLARHAPEVPVVSVETGDDAGVS
AVARAATRRVVLPPGTDSDAVMAAVVREAAALATAGDAVVLAPAAASLDMFDSYGHRGRS
FADAVGRLRASDITGQPR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaggatctggaactcgatcggttgcggggtcgtgcggtactcgtcgcgggggcg
gggatctcgggccgggcgacgatcgaaccgctccgtgaactcggagccctcgtcaccgtc
accgattcgaatgccgacgcccttgccgaatgcgcgaggctcggcgcagccaccgtgccc
atcgacgacctcctcgccgaccgcgaacgtgtccgtgacttcgcactggtggtgaccagc
cccggtttccgtcccgacgcaccgctgctctcggctgccgccggagacggcatccccatc
tggggagatatcgaactctcctggcacgtggaccgatcgggactctacggcccgccccgc
cgatggttggtggttaccgggaccaacggaaagacgaccacgacctcgatgctgcagtcg
atcctgtcggcggcaaaggtgcccagcgcagcctgcgggaacatcggacttccggtcctc
gaggccttacgccagacgtctcctcggcccgaagtgctggcggtggaactctcgtcgttc
caactgcactgggcaccgtccgttcggccggcggccggggccgtcctgaacatcgccgag
gaccacctcgactggcacggcggtatgcagtcgtacatcgacgcgaaggcgcgagcgttg
accggcaatgtcgcagtactgggtctcgacgacgacgtggcagcgtccctcgcatcctcc
tcacccgccgaacgcacggtgggcttccgagtggggatcccggggccgggggagttgggg
atcgaaaacggccacctggtggatcgggcgttcgccgacggactgcggctggccccggcg
gaggggattaccccgtccggtcctgcgggattgatggatgcgctcgctgcggcagcgctc
gcgcgcgccgcgggggtggggcccgaggccgtggcccgcggtctggcgagttacgtcgtc
ggcccgcaccgcggtgcacgcgttgccgagatcggcggggtcaccttcgtcgacgactcg
aaggccaccaacccgcacgcggccgggccgtcgattctcgcgcaccaacgcgtggtgtgg
atcgccggcggcctcctcaaaggcgcccaggtcgacgacctgatcgtcgaggtggccgac
cgcctgaccggagtcgtgctactcgggcgtgacgccacccacatcgccgagtcgcttgcg
cgacacgcccccgaggttcccgtggtcagtgtcgaaacgggagacgatgctggagtgagt
gctgttgctcgagccgcgacccgacgggtggttctgccgcccggtaccgacagcgacgcg
gtcatggcagccgtcgtgcgtgaggcggctgccctggcgacggcgggtgacgccgtcgta
ctggctcctgccgcggcttcgctcgacatgttcgacagctacggtcatcgaggtaggagc
ttcgccgacgcggtcggtcggctgcgtgcatcggacattaccgggcagccgcgatga
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