Rhodococcus oxybenzonivorans: CBI38_17430
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Entry
CBI38_17430 CDS
T08279
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz00300
Lysine biosynthesis
roz00470
D-Amino acid metabolism
roz01100
Metabolic pathways
roz01110
Biosynthesis of secondary metabolites
roz01120
Microbial metabolism in diverse environments
roz01230
Biosynthesis of amino acids
Module
roz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBI38_17430
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBI38_17430
Enzymes [BR:
roz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CBI38_17430
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Gene cluster
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AWK73071
UniProt:
A0A2S2BWQ4
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Position
complement(3731456..3732325)
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AA seq
289 aa
AA seq
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MDFSKGHGTENDFVVLPDLDVRLDLTVPRVKALCDRRRGLGADGVLRVAKAGALAEAGVL
ADLPDGTSADDWFMDYRNADGSLAEMCGNGVRVFAHYLLSTGLETRDEFVVGSRAGGKPV
VVHSAAGPLGEVTVDMGKVRDLGSSAATLDGKVFNGIGIDVGNPHLACVDPHLTAASLSA
LDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAALRH
EGADSGEVIVRIPGGQVIVSLSDGRATLRGPSVLVASGTVDDSWWNALT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcaaggggcacggaaccgagaacgacttcgtcgtccttcccgatctcgac
gtgcgcctcgacctgacggtgccgcgggtgaaggcactgtgcgatcgccggcgcggactc
ggcgccgacggcgtcctgcgggtcgccaaggcgggcgcgctcgccgaggccggtgtcctc
gccgacctgcccgacggaacgtccgccgacgactggttcatggactaccgcaacgcggac
ggttctctcgccgagatgtgtggcaacggcgtccgggttttcgcccactaccttctgtcc
accggactcgagacacgcgacgagttcgtggtcgggagtcgtgccgggggtaagcctgtt
gtcgtccactcggccgcgggtccgctcggtgaggtgaccgtcgacatgggaaaggttcgc
gacctcggatcgagcgctgccaccctcgacggcaaagtgttcaacggaatcggcatcgac
gtcggaaatccgcatctggcgtgcgtcgacccccacctcaccgccgcatcactctccgcg
ctcgacctgaccgccgcgcccggcttcgaccccggcttcttcccgcacggcgtcaacgtc
gagatcctcacccgcatcgattccggtgcagtcgacatgcgggtccacgagcgcggggtc
ggggaaacacgctcttgcgggaccggaacggtcgcagcggcaacagctgctctgcgtcac
gagggcgccgactcgggggaggtcatcgtccgcattcccggtggtcaggtcattgtttcg
ctgtccgacggccgggcgaccctgcgcgggccgtccgtcctggtggcgtcgggcactgtc
gacgattcgtggtggaacgcgctcacctga
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