Rhodococcus oxybenzonivorans: CBI38_17660
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Entry
CBI38_17660 CDS
T08279
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
roz
Rhodococcus oxybenzonivorans
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roz03016
]
CBI38_17660
Enzymes [BR:
roz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CBI38_17660
Transfer RNA biogenesis [BR:
roz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBI38_17660
Prokaryotic type
CBI38_17660
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AWK75635
UniProt:
A0A2S2C431
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All DBs
Position
complement(3774588..3775502)
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AA seq
304 aa
AA seq
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MPAREKPSSGLVGAGLLIVDKDAGITSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKMLGLLALTTKAYTATIRLGQSTATDDAEGETLASADASAVRDEEIAAHVALLTG
EISQVPASVSAIKVDGQRAHARIRAGEEVELAARSVTVSRFDVVARRDEGTFVDLDVEVE
CSSGTYIRSLARDLGAALGVGGHLTRLRRTRVGPFTLDHARTLEQLAEEPAVSLDIDAAA
QTAFPHRLVDAAEAESISQGRWLEPIGIKGVYAAIDPGGSTIALLQERGKRASSVMVVRP
ATLR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcgcgtgaaaagccttcgtccggtctcgtcggtgccggtctgctcatcgtcgac
aaagacgccgggatcaccagccacgatgtcgttgcgcggtgccgcaagctcctcggtacc
cggaaggtcgggcatgcgggcactttggatcccatggcgacgggcgtcctcgtcctcggc
gtggagcgggccacgaagatgctcgggcttctggcgttgaccacgaaggcgtacaccgcg
actattcggttggggcagtcgaccgccaccgacgacgccgagggcgagactctggcgtcg
gccgatgcttctgctgtgcgagacgaggagatcgccgcgcacgtggcgctcctcacgggc
gagatttcgcaagttcctgcgagcgtcagtgccatcaaggtcgacgggcaacgcgcccat
gcccggattcgtgcgggcgaggaagtggaactggcggcgcgctcggtgacggtgtcccgc
ttcgacgtggtcgcgcgacgcgacgagggcacgttcgtcgatctggatgtcgaggtggaa
tgttcgtccggcacctacattcgttctctcgcccgcgatctcggcgccgcgctcggggtg
ggcggtcatctgacaaggttgcggcgaacgcgagtcgggcccttcacactggaccatgcc
cgcaccctcgaacagttggccgaggagccggcggtcagcctcgacatcgacgcggcagcg
cagaccgcgttcccgcatcgactcgtcgatgctgcggaggccgagtcgatcagtcagggc
cggtggctcgagccgatcggaatcaagggtgtgtacgccgccatcgacccgggcggctcc
accatcgcactgctgcaggagcgcggcaagcgtgccagttcggtgatggtcgttcgtccg
gcgacgctgagatag
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