Rhodococcus oxybenzonivorans: CBI38_18275
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Entry
CBI38_18275 CDS
T08279
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
roz
Rhodococcus oxybenzonivorans
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roz03032
]
CBI38_18275
03036 Chromosome and associated proteins [BR:
roz03036
]
CBI38_18275
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_18275
DNA replication proteins [BR:
roz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBI38_18275
Chromosome and associated proteins [BR:
roz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CBI38_18275
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CBI38_18275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Saf4_Yju2
PARM
Motif
Other DBs
NCBI-ProteinID:
AWK73217
UniProt:
A0A2S2BX50
LinkDB
All DBs
Position
complement(3903097..3903771)
Genome browser
AA seq
224 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATEAVEHVVDTIVRAVHRGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGGQKLPATGPAVKRGASATATKAAAKKAAA
KKSAAAKKTAAKKAPAKATATKTAAKKAPAKTTATKTAAKKAPAKTTATKTAAKKAPAKT
TATKTAAKKAPAKTTAKKTAAKKAPAKTTAKKTAAKKAPAKRSK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcagagctcatcgatgttctgaccgagaagctgggttcggacaggcgcacg
gcaactgaagctgtcgagcatgttgtggacaccattgttcgggcagtgcaccgcggcgac
agtgtgaccatcaccggattcggcgttttcgagcagcgccgccgtgcggcccgtgtcgca
cgtaacccccgcacgggtgagaccgtgaaggtcaagcccacgtcggtgccggcattccgc
ccgggcgcccagttcaaggcggttatcgctggcggccagaagcttccggccacgggtccc
gcggtcaagcgcggtgcatcggcaaccgccacgaaggctgcggccaagaaggcagcggcg
aagaagtcggccgccgccaagaagacggccgcgaagaaggcgccggcgaaggcgacggcc
accaagaccgccgccaagaaggcgcccgcgaagacgacggccaccaagaccgccgccaag
aaggctccggccaagacgacggccaccaagaccgccgccaagaaggctccggccaagacc
acggccaccaagaccgccgccaagaaggcgcccgcgaagacgacggcgaagaagaccgcc
gccaagaaggcgcccgcgaagacgacggcgaagaagaccgccgccaagaaggctccggcc
aagcgcagcaagtag
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