Rhodococcus oxybenzonivorans: CBI38_18850
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Entry
CBI38_18850 CDS
T08279
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz03420
Nucleotide excision repair
roz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBI38_18850
03430 Mismatch repair
CBI38_18850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_18850
Enzymes [BR:
roz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBI38_18850
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBI38_18850
MMR (mismatch excision repair)
Other MMR factors
CBI38_18850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWK73313
UniProt:
A0A2S2BXK9
LinkDB
All DBs
Position
complement(4015407..4017542)
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AA seq
711 aa
AA seq
DB search
MMDAMSAGAPEVTSTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVASGHVA
AGQVLAVTFTARAAGEMRGRLRSLGIGDGGTQVQARTFHAAALRQLRYFWPQVVGDTEWR
LLDRKFAVVSAAAGRVGLSTSTESVRDLASEIEWAKASLIAPEDYPRAVAKVHREAPADA
AKVAEVYHGYEQLKARGQDAMLLDFDDLLLHTAAALEEHSAVAEEFRDRYRCFVVDEYQD
VTPLQQRVLDAWLGERDDLTVVGDANQTIYSFTGATPNYLLDFSRRFPEATVVRLERDYR
STPEVVSMANRVIGAARGRIAGTRLQLIGQRKSGPEPTFAEFDDEPAEAAGVARAIKRLI
ARGTPAAEIAVLYRINAQSEVHEQALTKLDIPYQVRGGEGFFTRTEVRQAVSALRQAAGR
DDLPDAVGADLVTLVRAVLVPLGLTDTEPSGAQARERWSSLSALVALTEEQLAQDPDLTL
DGLLRELGLRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLTDGTLPIQHVLGDANSA
PDEAAIEEERRLLYVGVTRAREHLQMSWALSRNEGGRKSRRRSRFLHGLIPEDSPASRIA
APPQNAKKRPRCRLCGKPLIGTTATMLGRCEGCPSNVDVELLDSLRSWRLEKSRELKVPA
YVVFSDNTLTALAEQRPQDDRGLVAIPGIGAKKLEQFGEDVLGVIRSSGSP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgccatgtcagcaggtgcccccgaggtgacgagtaccggcctcgatcccgaa
cagtccgcggccgtcctcgcgcctcgtggtccggtctgcgtgctggcgggcgcgggcacg
ggaaagacgcggaccatcacccgaaggatcgcccacctcgtcgccagcggacacgtcgcg
gcgggacaggtactggcggtcacgttcacggcccgggctgcgggggagatgcgaggcagg
ctgaggagcctcggaatcggtgacggcggcacccaggtgcaggcgcgcaccttccacgcg
gccgcactgcgccagctgaggtacttctggccgcaagtggtcggagacaccgaatggcgg
ctgctggaccgaaagttcgcggtggtctccgctgcggccggccgggttgggttgtccacc
agtaccgaaagtgttcgggacctggcaagtgagatcgaatgggccaaggcgtcactgatc
gcgccggaggactatccgcgcgcggtggcgaaggtgcaccgcgaggcgcctgccgacgcc
gccaaagtggccgaggtgtatcacggttacgagcaactcaaggctcgaggccaggatgcg
atgctgctcgacttcgacgacctcctgctgcacaccgcggccgccctggaggagcattcg
gcggtagcagaggagttccgggaccggtaccggtgcttcgtggtcgacgagtaccaggac
gtgacgccactgcagcagcgggtgctcgatgcatggctcggtgagcgggacgatctcacg
gtcgtcggcgatgccaaccagaccatctactcgttcacgggcgccacgcccaactatctg
ctcgacttctcgcgacggttccccgaagccaccgttgtccgcctcgagcgcgactaccgg
tcgacccccgaggtggtctcgatggccaaccgggtgatcggcgcggcgcggggcaggatc
gctggtacgcggttgcagttgatcggccagcggaagtcggggcccgaaccgactttcgcg
gagttcgacgacgagcctgccgaggccgccggggtggcccgtgcgatcaagcggctcatc
gcccgcggaacgcctgccgcggagatcgcggtgctgtaccggatcaacgcccagtccgag
gtgcacgagcaggccctgaccaagctcgacatcccatatcaggtccgcggcggcgagggc
tttttcacgcggaccgaagttcgtcaggccgtatcggcactgcgtcaggcggccggtcgc
gacgacctgcccgatgcggtcggtgccgacctcgtcaccctggtgcgtgccgtgctggtg
ccgctgggtttgaccgacacggaaccttcgggtgcgcaggcccgcgagcgatggtcctcg
ctgtccgcgctcgtcgctctcacggaggaacagctggcgcaggatcccgatctgacgctc
gacggactgctccgcgaactcggccttcgcgcggaggcgcggcacccaccggtggtacag
ggcgtcacgctggcgtcgttgcatgccgcgaagggactcgagtgggacgcggtgttcctg
gtaggtctgacggacggcaccttgcccattcagcacgtgctgggcgatgccaactcggct
cccgacgaggccgcgatcgaggaggagcgcaggcttctctatgtcggggtcacccgtgcg
cgcgaacacctgcagatgtcctgggcgctctcccgcaacgagggcggccgcaagagccgt
cggcgttcccggttcttgcacgggctgattccggaagactcgccggcgtcgcgcatcgcc
gctccaccccagaacgcgaagaagcgtccgcggtgccgactgtgtggaaagccactgatc
ggtaccacggccacgatgctcggacggtgtgaaggttgcccgtcgaatgtggatgtggaa
ctgctcgattcgctgaggtcgtggcggctcgagaagtccagggaattgaaggtgcccgcg
tatgtggtgttcagcgacaacacgctgacggcgctcgccgaacagcgcccgcaggacgac
cggggacttgtcgcgatccccgggatcggcgccaagaagctcgaacagttcggtgaggat
gtgctgggtgtgatcagatcgagcggatcgccatga
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