Rhodococcus oxybenzonivorans: CBI38_19975
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Entry
CBI38_19975 CDS
T08279
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBI38_19975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roz03021
]
CBI38_19975
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_19975
Enzymes [BR:
roz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBI38_19975
Transcription machinery [BR:
roz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBI38_19975
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBI38_19975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AWK73502
UniProt:
A0A2S2BY29
LinkDB
All DBs
Position
complement(4253292..4254353)
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLSLKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDADGTEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgacaaccgctcgaag
ttcgtcatcgagcccctcgagccaggtttcgggtacaccctcggcaattcgctccgccgc
acgctgctgtcttcgatccccggcgctgctgtcaccagcatccgcatcgacggcgttctg
cacgagttcaccacggtccccggtgtgaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgtaagcag
ggccccggcgctgtgaccgcaggcgacatcgtgcccccggccggcgtcaccgtgaacaac
ccggatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtccccgccgtccagaacaaggcgtccggcgcagagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgcgtcgagcagcgcaccgacttcgatcggctcgtgctcgatgtggaaaccaagaac
tccatcaccgctcgggacgcgctcgcttctgcgggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccctcgcccgccgag
gccgatcacatcgcttccttcggactgcccatcgaggacctggacctcaccgtccgttcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgacctgctcgacatccgcaacttcggacagaagtccatcgacgaggtgaaggtcaag
ctgcattcgctgggcttgtccctcaaggacagccccgcgtccttcgatcccaccaccgtt
gccggttacgacgccgccaccggaacgtggagtgacacggatgccggttccttcggcgat
gccgacggtaccgaggactacgccgagaccgaacagctgtag
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