Rhodococcus oxybenzonivorans: CBI38_21165
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Entry
CBI38_21165 CDS
T08279
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBI38_21165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_21165
Enzymes [BR:
roz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CBI38_21165
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBI38_21165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWK73709
UniProt:
A0A2S2BYQ8
LinkDB
All DBs
Position
complement(4534991..4535560)
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AA seq
189 aa
AA seq
DB search
MRFTRAELESYRGAEVPDLIGPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALLAAGI
IDRPIDPTAGMSDADRDHLIERGVGITNMAVRATAKADELTADELAVGAERLRAVVRGTR
PHVVAVAGITAYRTAFRERAAKKGRQPGDLDGAALWLVPNPSGLNAHETVTTLAASYREA
AIEAGIVKV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcacgcgtgccgagctcgagtcgtaccgcggcgcagaagttccggacctgatc
ggacccggatgccggttgcttttcgtcggtatcaacccgggactgtggaccgccgccacc
ggggcgcacttcgcgagaccgggtaaccggttctacccggctctgctggccgccggaatc
atcgaccggcctatcgaccccaccgccgggatgtcggacgccgaccgggaccacctgatc
gagcggggagtcggcatcaccaatatggcggtgcgcgccaccgccaaggccgacgagctg
actgccgacgagttggcggtcggcgccgagcgacttcgcgcggtggtgcgcggcacccgc
ccgcacgtcgtagcggttgccggaatcacggcgtaccggacggcgttccgcgagcgtgcg
gcgaagaagggaaggcagccgggtgatctggacggggctgccctgtggctggtgcccaat
ccgagtgggctcaacgcgcacgaaaccgtcactactctcgccgcgtcgtatcgggaggcc
gcgatcgaggcaggcatcgtgaaggtctga
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