Rhodococcus oxybenzonivorans: CBI38_21950
Help
Entry
CBI38_21950 CDS
T08279
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
roz
Rhodococcus oxybenzonivorans
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_21950
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBI38_21950
Archaeal homologous recombinant proteins
CBI38_21950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_22
AAA_15
AAA
Motif
Other DBs
NCBI-ProteinID:
AWK73827
UniProt:
A0A2S2BYX2
LinkDB
All DBs
Position
complement(4720708..4723689)
Genome browser
AA seq
993 aa
AA seq
DB search
MRLHRLEVEAFGPFANSVEVDFDRLGADGLFLLHGQTGAGKTTVLDAVAFALYGTVPGAR
KDGKRLLSDHAQAGSVPTVTLEVTISGRRLRLVRSPEFERPKRRGSGTIKENAKATLTWL
DGRGEHLSRIPDIAEEIGRLMGMSADQFFQVVLLPQGEFARFLRADNEERGQLLERLFDT
TRFGTVEEWFLNRRRASAHDLDEHQRSIDVLIAKVATAAGIEGGADADPVTWAHKLEEEA
RATRDVAVDELEKVKSDAALTRDALAQARRILELQKRRARAEAELAAYEAGASERAVLAA
EVAAARRAEPVAVVVREANAARDKAATAARRVAAIADRLCSTAGGAEVVEQLSWPPNSEE
REHLRTCIRSWRDDVVRLDGVLAEAKVGDRLEVELGRLRAREVGLADTRAELTREREELP
GAIRVAERALDEAENARVSLPGLEDVRARAADAAAAAVELRQCRDRRDALERAVLDARRT
HQDAREHWLTLLQRRILGMAAELAGTLEDGQPCQVCGSVEHPDPAAESELSVTKADEDAA
LAAEQKAAAKMNTAAEALATADRTIDVLVQRCGDGDADHLGAELASAEAALRHASDLSEQ
AASRARHLGELRDRETQLHTHSHDLAVEAATVAEKLTSGAAQLEEIRARVREAAGEDESP
AARRARIAVLADAASELLDARDEGAAAESSAQELAAKAELLAREAGFDRTSDAVAAVRPV
ARQDEIDARLTAARDAEVGARRILDEPEIAAVADAAPVDLVSVQQAHDAATEAVDVAVAV
ASEAERRLLDLERFVGQLERAAAAIAPMQAEHEELAALAEVIAGRGQNSRKMSLRSYVLA
ARLEEVAVSASARLSRMSAGRYSFVHTDEAGPRGRRGGLGLDIRDDYTGVVRSAKTLSGG
ESFLASLSLALGLADVVAAESGGVVLDTMFIDEGFGTLDADTLDSVMGVLDELRDGGRVV
GIVSHVDEMRQRIPSRLHVIRGRTGSTLEVIAG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcatcgactcgaagtcgaagcgttcggaccgttcgcgaattcggtcgaggtc
gatttcgaccgactcggcgccgacggcctctttctgttgcacgggcaaaccggtgcgggc
aagaccacggtgctcgatgcggtggccttcgcgctgtacggcaccgttcccggcgcacgc
aaggacgggaaaaggctcctctccgaccatgcgcaggcgggctccgtgccgacagtgaca
ctcgaagtgaccatttccggtcgccgcctccggctggtccgcagtcccgaattcgaacgc
ccgaaacgtcgaggttcgggaacgatcaaggagaacgccaaagcgaccctcacgtggctg
gacgggcgaggagaacacctgtcccgaatccccgacatcgccgaagagatcggccggttg
atggggatgagcgccgaccagttctttcaggtggttctcctcccacagggcgagttcgcc
cgcttcctgcgtgccgacaacgaagaacgcggacagctcctcgagcggttgttcgacacc
acgcggttcgggacggtggaggagtggttcctgaatcggcggcgagcgagcgctcatgac
ctggacgagcatcagcgttccatcgacgtgctgatcgccaaggtcgccacggcagccggt
atcgagggcggtgcggacgccgatcctgtcacgtgggcgcacaaactggaggaagaggcg
cgcgccacccgcgatgttgccgtcgatgagctcgagaaggtcaagtcggacgcggccctg
acgcgagatgctctggcgcaggcgcgccgaatcctcgaactccagaaacggcgtgcccgg
gcagaagccgaactcgccgcctacgaggccggagcttcggaacgggcggttctcgccgcc
gaggtcgccgcagcgcggcgggcggagccggttgccgtcgtcgtccgcgaagcgaacgct
gcccgcgacaaggcggcgaccgcggcgcgacgggttgccgccatcgcagaccggctgtgt
tcgacggcaggtggcgccgaggtggtcgagcaattgtcgtggccgccgaacagtgaagag
cgtgaacatcttcgaacctgcatccggtcgtggcgcgacgatgtcgtccgcctcgacggt
gtgctcgcagaggcgaaagtgggggaccggctcgaagtcgaactcggccggctgcgcgcc
cgggaagtcgggctggccgacacccgcgcggagcttacccgcgaacgtgaggagctgccc
ggcgctattcgggtcgcggagcgagcgctcgacgaggccgagaatgctcgtgtgtcgttg
ccggggctcgaggatgttcgtgctcgcgcggccgacgccgccgcggccgccgtcgagctt
cggcagtgccgtgaccggcgcgacgcactcgagcgcgccgtgctcgacgcccggcgaacg
caccaggatgcgcgcgaacactggctgactctcctgcagcgccggattctggggatggcc
gccgaactcgcgggcacgctcgaggacggtcaaccgtgtcaggtgtgcggttcggtggag
caccccgaccccgcggcggagtccgaactgtcggtcaccaaggccgatgaggatgcggcc
ctcgcagcggaacagaaggccgccgcgaagatgaacaccgcggcggaggctctggcaacg
gcagaccgcacaatcgacgttctggtccagcgttgcggggacggcgacgccgaccacctc
ggggccgaactcgcctccgcggaggcggcactgcgccatgcgagcgacctcagcgagcag
gccgcgtcgcgggcccgccatctcggtgagctccgcgaccgtgagacgcaactgcacact
cattcgcacgaccttgcggtcgaggctgcaaccgtcgccgagaaactcacctcgggtgct
gcgcagctcgaggagatccgggcgcgggtgcgtgaggccgcaggcgaggacgagagtccc
gcggcccgccgcgcccgcatcgcggtgctggcggacgccgcgtccgaactgctcgacgcc
cgggacgagggagcagccgccgagtcttcagcccaggaactggccgcgaaggccgaacta
ctcgctcgcgaagcaggattcgaccgaacgagcgacgcggtggcggcggtgcgtcccgtt
gcccggcaggacgaaatcgacgcccgactcaccgctgcccgtgatgccgaggtgggtgcc
cgccgaatactcgacgaaccggagatcgccgccgtcgcggatgctgcgccggtcgacctg
gtgtccgtccagcaggcacacgacgccgcaacggaggcggtcgacgtcgcggtggcggtg
gcgtcggaagccgaacgacgactactcgacctcgagcgtttcgtcggccagctcgagaga
gcggccgcggccatcgccccgatgcaggcggaacacgaggaactggccgccctcgccgag
gtgatcgccggtcgtggtcagaactcacgcaagatgtcgctgcgctcctatgtgctcgct
gcgcggctcgaggaagtcgcggtctcggcgtccgcccggttgagccggatgtccgctggc
cgctactcgttcgtccacaccgacgaggccggcccgcgtgggcgtcgtggtggcctcgga
ctcgatatccgcgacgactacaccggcgtggtgcggtcggcgaagacgctgtccggcgga
gagtcgtttcttgcctcgctgtcgctggccctgggactcgccgacgtggtcgcggcggag
tccggcggtgtcgtcctcgacaccatgttcatcgacgaagggttcggcaccctcgacgcc
gacacgctcgactcggtgatgggcgtgctcgacgaactacgggacggtggtcgcgtggtc
ggtatcgtcagccacgtcgacgagatgcgtcagcgaatccccagtcgcctccacgtgatt
cgtggacgcaccggctcgacgctcgaggtgatcgcgggctga
DBGET
integrated database retrieval system