KEGG   Rhodococcus oxybenzonivorans: CBI38_28235
Entry
CBI38_28235       CDS       T08279                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
roz  Rhodococcus oxybenzonivorans
Pathway
roz00061  Fatty acid biosynthesis
roz00071  Fatty acid degradation
roz01100  Metabolic pathways
roz01212  Fatty acid metabolism
roz02024  Quorum sensing
roz04146  Peroxisome
Module
roz_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:roz00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CBI38_28235
   00071 Fatty acid degradation
    CBI38_28235
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CBI38_28235
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CBI38_28235
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:roz01004]
    CBI38_28235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roz04147]
    CBI38_28235
Enzymes [BR:roz01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CBI38_28235
Lipid biosynthesis proteins [BR:roz01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CBI38_28235
Exosome [BR:roz04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CBI38_28235
  Exosomal proteins of breast cancer cells
   CBI38_28235
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2
Other DBs
NCBI-ProteinID: AWK74875
UniProt: A0A2S2C1W1
LinkDB
Position
6134132..6135775
AA seq 547 aa
MHPEMSLWLSSPSSGVRDITLGDLLREAASTVPDRVALVDGVPEADRRTEWTYSQLLSET
EAVARALLAEFEPGDRIGIWSPNSAEWVILQQAVAMAGMVVVAANPAYRAHELEYILRQS
GAVALFYRDSYRGTDLGSIVDEIRPRVPALRMTISTSTWRFFVAAAADQTMELPAVVPTD
PVQIQYTSGTTGFPKGALLHHKGIINEAKFVFERAGMEEGGVCINAMPMYHIGGGAVTEL
GTFSSLGTYVVLPGFDAGQTLEMIETYGGTHSLMVPTMLIALLEHPDLATRDISSLRTVL
SGAATVPESLIKQVIEQLDCQFTILFGQTEMHGVISQTRVTDDPVDQATTVGQPLPELEV
KIADPVSGEVVPIGVQGEICCRGYQNMLGYFNMPDATARTIDADGWLHMGDLGTMDARGF
IRITGRLTDVIIRGGVNIYPREIEELLFQHPDVADVIVVGIPDEKWGEQVGAVIRLHEGR
ERPAPDEMKTWCRERISAHKAPSLWFFTDQFPMTPTGKIQKFKVSEQISAGELRSAVETV
VSPAQSR
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgcacccagaaatgtctctctggctgtcctcccccagttcgggagtacgcgacatcacc
ctcggcgatctcctcagggaagctgcgagcacagtgccggatcgagttgcactcgtcgac
ggcgttcccgaagccgaccgacgcaccgagtggacgtacagccagctgctgtcggagacg
gaagctgtggcccgtgccctgcttgccgagttcgagcccggggaccggatcgggatctgg
tcacccaacagtgcggagtgggtcattctccaacaggccgtcgcgatggcgggaatggtc
gtcgttgccgccaaccccgcatatcgtgcccacgaactcgagtacatactgcgacagtcc
ggagcagtagcactgttctatcgcgactcctaccgcggaaccgatctcggttcgatcgtc
gacgagatccggccccgcgtcccagccttgcgcatgaccatcagcacaagcacctggcga
ttctttgtcgccgccgccgccgaccagaccatggagctacccgcggttgttccgaccgac
cccgtccagatccaatacacctctggaacaacaggcttcccgaagggagctttgctgcat
cacaagggcatcatcaacgaggcgaagttcgtcttcgaacgcgcggggatggaggagggc
ggagtctgcatcaacgcgatgccgatgtaccacatcggcggtggggcagtgactgaactg
ggaacgttctcgtcgctgggtacatacgtcgttctacccggattcgacgcggggcagacg
ctcgagatgatcgaaacctacggcggtacacactcgttgatggttccgacgatgctgatc
gcgttgctcgaacaccccgatcttgcgacacgggatatttccagcttacgcacggtgctg
tccggggccgcgaccgtacccgaaagtctgatcaagcaggtcatcgaacaactcgattgt
cagttcacgatcttgttcggacagaccgaaatgcacggcgtgatcagccagacgcgcgta
accgacgaccctgtcgatcaagcaaccacggtgggccagccccttcccgaactcgaggtc
aagatcgctgaccccgtatcaggtgaagtcgtgccgatcggggtacaaggcgaaatctgc
tgccgcggttatcagaacatgcttggctacttcaatatgccggacgctaccgccaggacg
attgacgctgacggctggttgcacatgggagatctcggcaccatggacgcacgcggattc
atcaggattaccggtcgcctcactgacgtcatcattcgcggcggagtgaacatctaccca
cgggagatcgaagaactactgttccagcacccggacgtcgccgacgtgatcgtagtgggc
atcccggacgagaagtggggcgagcaagtcggcgccgtcatccgactccacgaaggccgc
gagcgtccggcgcccgatgaaatgaaaacctggtgtcgtgagcgcatctctgcccacaag
gctccatccctgtggtttttcaccgaccagtttccgatgacgccgaccggtaagatccag
aagttcaaagtgtctgaacagatcagcgcgggcgagctgaggtcggcagtcgaaaccgtg
gtttcccccgcccagtcgcgttga

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