Rhodococcus oxybenzonivorans: CBI38_35520
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Entry
CBI38_35520 CDS
T08279
Name
(GenBank) hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz00300
Lysine biosynthesis
roz00470
D-Amino acid metabolism
roz01100
Metabolic pathways
roz01110
Biosynthesis of secondary metabolites
roz01120
Microbial metabolism in diverse environments
roz01230
Biosynthesis of amino acids
Module
roz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBI38_35520
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBI38_35520
Enzymes [BR:
roz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CBI38_35520
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWK76747
UniProt:
A0A2S2C783
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All DBs
Position
pRB29:33121..34437
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AA seq
438 aa
AA seq
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MTRTAPYPPAVGDEPYVVPAGTPVTAAVAAAARTLATEGALPAYLYDLTALDAHVSAVRA
AFDATDTRIELLHAVKANPDPELLTVIARHVHGLEVASGGELAHVRRHLPSTPLAFGGPG
KTDAELAAALAADVDCYHVESLHEARRLDAAARAVGRTARVLLRVNLPSHSPAGGDAAAL
TMGGVPSPFGMDPAEADAVATERGQLPGIEVIGIHAHLASGHDAAGCAGLADTVLTWAGH
YAHRHGLALHQVNVGGGMAVDYHRPDRLFDWADYARRLDRIVAAAAPDTGRPLTVRIEPG
RAVSAYSGWYATRILDLKRSQGSWFAVCAGGTHHLRTPAAKGHDQPLAVLPVRAWDHPWP
RPTVSDEAITFVGQLCTPKDVLARQVPVPTLAVGDLVVFAMAGAYAHNISHHDFLMHPAP
TVVHLPRRRDPHQPGSRP
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaccgccccgtatcccccggccgtcggcgacgaaccgtacgtggtccccgcc
gggaccccggtcaccgccgctgtcgcggcggccgcccggaccctggccaccgagggcgca
ctgcccgcctatctctacgacctgacggctctcgacgcgcacgtctcggcggtccgcgcc
gccttcgacgccaccgatacccggatcgaactcctgcacgcggtcaaggccaacccggat
ccggagttgttgacggtcatcgcccggcacgtgcacggcttggaagtcgccagcggcggc
gaactggcccacgtgcgccggcacctgccctccaccccattggctttcggcggccccggt
aagaccgacgccgaactggcggccgcactggccgccgacgtggactgctaccacgtcgag
agtctgcacgaggcgcgccggctggacgccgccgcccgggccgtcggccgaaccgcccgg
gtgctgctgcgagtcaacctgccctcacactcaccggccggtggtgatgccgccgccctg
accatgggcggggtgcccagcccgttcggcatggaccccgccgaagccgatgcggttgcc
accgaacgtggacagctgcccgggatcgaggtgatcgggattcacgcccacctggccagc
gggcacgacgccgccggctgcgccggcctcgccgacacggtgctgacctgggccgggcac
tacgcccaccggcacggcctggcgctgcaccaggtcaacgtcggcggcggtatggcggtg
gactatcaccggcccgaccggctcttcgactgggcggactacgcccggcgactcgaccgg
atcgtggccgccgctgcgcccgataccggccgacccctcaccgtgcgcatcgaacccgga
cgcgcggtgagcgcctactccgggtggtacgccacccgcatcctcgacctcaaacgcagc
caaggcagctggttcgccgtctgcgccggaggcacccaccacctgcgcaccccggcggcc
aagggacacgaccaaccgctggccgtgctgccggtgcgtgcctgggaccacccgtggcca
cgcccgacggtctccgacgaggcgatcaccttcgtcggccagctgtgcacccccaaggac
gtactcgcccgccaggtacccgtgcccacactggcggtgggcgatctggtggtcttcgcg
atggccggtgcgtacgcgcacaacatcagccaccacgacttcctcatgcatcccgctccc
acggtcgtgcaccttccgcggcgccgcgatccccatcaaccgggctcacgcccctaa
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