Rhodococcus oxybenzonivorans: CBI38_36575
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Entry
CBI38_36575 CDS
T08279
Name
(GenBank) peptigoglycan-binding protein LysM
Organism
roz
Rhodococcus oxybenzonivorans
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Gene cluster
GFIT
Motif
Pfam:
LysM
Phage_tail_X
Motif
Other DBs
NCBI-ProteinID:
AWK76896
UniProt:
A0A2S2C7P2
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Position
pRB29:complement(245511..248648)
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AA seq
1045 aa
AA seq
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MSANAARSRLAGLGYLLILVMLVAGIPAALWALRGNPLDIPWSDFEGLLASPDDGSLLIA
LLPLVGWAAWATFTVPILLELAATLRGVKAPKLRLLRSQQRTATFLVSGALLLLTAGTAT
AAPVLTQPADVGSTSPYAPHSQQEDPSASPQTQVDPRATPVAVQPAGPTVTTVRGDTLWG
LAQQHLGEGRRYTEILDLNRTAVPEPGFLAEGLTLQLPASQPEVVRGAYTVKQGDTLWDI
AERELGDPLRFMEITTPDGTPAGELITVGQQLIMPTAASAAADATPAPALVPPADAVPAP
APAPAPAPEAVPAPAPAPAPVDVAPNWQLDPVEPQMPADLVTNDAPAETDTADGSSDVVF
IGLGISAVAAAGLTGHLALRRRKQQHRRRRGERIALPAETAIQAEQALTAAADPLTTTHV
DIALRHLAHHCRSTGIALPGLLAVFVGDNDIELGLVEQVSLPAPWTQIDDTTWSVDPRAF
PRSVPEAEISPYPALTAVGTSDDGRDLLLNLEQIGHLAISGTPTATAGVLRALAVELAVS
PIADSLHLNLVGYCADLPEAIDNGRITHSKYADTVLTTLANHLELDSEILADNDFESIAQ
ARTSYTTSELTAPEIVLIADPVTEAQAGLLAGIARHAPRIAFAAVTTESAHTNAKWTLEV
NDNGSAVLARPGAASADITVTTLNEESYASVLDLLTTTSREPRIAHTGDNPDTRWEAARL
DNDISTDEFITSSDPATFSVVGNEDLDHAVDRPEPSDSDEITAERELPEADHIWIRLLGE
PAVTPPSPGPAEGREKSLTEIAALLITTDGGVLAADIDSKIWPHDVEAARTGTAEQEKEA
KARLRRRRNEALSRLRKWLGDTETGEPALTKSGDRTGRTPQRLHDAVTTDWDYWQELVNS
HPADVDTARLSAALALVTGQPFSSDDPTAYGWADHTKQDMISAVTDVAEELATRYIRGQQ
VRQDLAAAHAAAERGLKVDIVHEGCWRAAIIATHFSGDTETTQRLIDRMITELDALEEEP
EHETKMLLSQLDSTYGSHYRIGAAS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcaaacgccgcgcggtcccgccttgccggactcggctacctcctgatcctggtg
atgcttgtcgccgggatcccggccgcgctctgggcgctgcgcggcaatccgctcgacata
ccgtggtcggatttcgaaggtttgctcgcgagtccagatgacggcagtcttctcatcgcc
cttcttccccttgttggctgggctgcttgggccaccttcaccgtcccgattctgctcgaa
ctcgcggcgacactgcgtggcgtcaaagcgccgaagctgcgccttcttcgctcacaacag
cggacggcgacgttcctcgtcagcggcgccctcttgctcctgaccgccggaaccgccacc
gccgcacccgtcctgacccagcctgcggacgtgggaagcacctctccgtacgcgccgcac
tcgcagcaggaagatccgagcgcgtcaccgcagacccaggtggatccgcgggctaccccg
gtggcggtacaaccggcggggccgacagtgacgaccgtgcgcggagacaccctgtgggga
ttagcccagcagcatctcggagagggccgccgctacaccgagatcctggacctcaaccgg
actgctgtccccgagccagggtttctggccgaagggttgaccctgcagctgcccgcatcc
cagcccgaggtggtacgcggcgcctatacggtcaagcagggcgacaccctgtgggatatc
gccgagcgagagctcggcgatcctttgcgtttcatggagatcacgactcccgacggcacc
ccggctggcgagctgatcacggtcggtcagcaattgatcatgcccaccgccgcctccgcg
gcggctgacgctacgccggcgccggccttggtgccgccggctgatgctgttccggctccg
gctccggctcccgcgccggctccggaagctgttccggctcccgctccggcgcccgcgcct
gtggatgtcgcccccaactggcaactcgaccccgtcgagcctcaaatgcctgccgacctc
gtcaccaatgacgcgccggcagagaccgataccgcagacggctcatccgacgtcgtgttc
atcggtctcggaatctcagcggttgctgcagctggactcaccgggcatctcgctcttcgt
cgccgcaagcaacaacatcgccgccgccgcggcgagcgcatcgcccttcccgccgaaacc
gcgatccaggcggagcaagcactcacggccgccgctgatccgctcaccaccacccatgtc
gacatcgcattgcgacacctcgcgcaccactgcaggtccacgggtatcgctctgccgggc
ctgctggcggtcttcgtcggtgacaacgacatcgagctcggacttgtcgaacaggtctca
ctccccgcgccttggacacagatcgacgacacgacctggtcagtagatccgagagcgttt
ccgcgcagcgttcccgaggccgagatcagtccgtacccggcgctgacggcagtcggaacc
agcgacgacggtcgcgacctcttgctcaacctcgaacagatcggccacctcgccatcagc
ggcaccccgactgcaacagccggggtgctgcgtgcgctcgccgtcgagctcgcagtctcg
cccatcgccgacagcctccacctcaacctcgtcggatactgcgccgacctgccggaggca
atcgacaacggccgcatcacccactccaagtacgccgacacggtactgacgacactcgcc
aatcacctcgaactcgactccgaaatcctcgcggacaacgacttcgagtcaatcgcgcag
gcacgcacgtcgtacaccaccagcgagctgaccgcacccgagatcgttctgatcgccgat
ccggtgaccgaggcacaggccgggctactcgccggcatcgcacggcacgcaccccgaatc
gcgttcgccgcagtgaccaccgagagcgcacataccaacgccaaatggaccctcgaggtc
aacgacaacggctcggccgtccttgctcgtccaggagccgcgtcggccgacatcacagtg
accaccctcaacgaggagagctacgcgtccgtcctagacctactgaccaccacctcacgc
gaacctcgcatcgcccacacgggcgataaccctgacactcgatgggaagcagcccgtctc
gacaacgacatctcgaccgacgagttcatcaccagctccgatcccgcaaccttcagcgtg
gtcgggaacgaggacctcgaccacgccgtcgaccgaccagagccgtccgattcagacgag
atcaccgcagaacgcgagctgcccgaggcggatcacatctggatcaggctgctcggcgaa
cccgccgtcacacccccgtcaccagggccagccgaaggccgagagaagagcctgaccgaa
atcgccgcgcttctcatcaccactgatggcggagtcctcgccgcggacatcgacagcaaa
atctggccccatgacgtcgaagccgccagaaccggcacagccgagcaggagaaagaagcg
aaggcccggctccgccggcgccgcaacgaagcgctctctcgcctgcgtaagtggctcggt
gacaccgagaccggtgaacccgccctcaccaagtccggagatcgaactggccggaccccg
caacggctccacgacgccgtcacgaccgactgggactactggcaggaactcgtcaattcc
catcccgctgacgtcgacaccgcccggctatccgccgcactggccctggtcaccggtcaa
cctttcagtagcgatgaccccaccgcctatgggtgggccgaccacaccaagcaagacatg
atctccgccgttaccgacgtcgccgaggagctcgccacccgctacatccgcggccaacaa
gttcgccaggacctcgcggctgcacacgccgccgcggagaggggcctcaaggtcgacatc
gtccacgaagggtgctggcgtgcggcgatcatcgccacccacttctcgggtgacaccgag
accacccaaaggttgatcgatcgcatgatcaccgagctcgacgcccttgaagaagagccc
gaacacgaaaccaagatgctcttgagtcagctcgactccacctacgggagccactaccgg
atcggagcagcatcatga
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