Rhodococcus oxybenzonivorans: CBI38_36905 Help Entry CBI38_36905       CDS       T08279                                  Name (GenBank) DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism roz  Rhodococcus oxybenzonivorans Pathway roz03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:roz00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CBI38_36905  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:roz03400]     CBI38_36905 Enzymes [BR:roz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CBI38_36905 DNA repair and recombination proteins [BR:roz03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CBI38_36905 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_C Motif Other DBs NCBI-ProteinID:  AWK76986 UniProt:  A0A2S2C7Z8 LinkDB All DBs Position pRB11:15585..16559 Genome browser AA seq 324 aa AA seqDB search MRLIAPMLATAGALPDDPAERPWSFEMKYDGCRMLASVGGGREPVLWTRALNVVTPSYPE IAEALTAAFGGRGRIVLDGEIVVLDHGRPSFGLLQRRLGVAHATKPLQRRIPVTFLPFDV LVLGDLDLMSASYLDRRAELAVLDSIIQDVGGLPITVPPHWENQSSKIMLNAARSAGMEG ILVKRSTSIYLPGQRSRSWIKHAIRTRSSVLVIGFVGSSRSVAALILGAYDAENRLIQVG SVSSGLTVPMRRQLREDFRPLERPSSPLTDPSAAAETFPGIQWLTPRLVVDVAYRAHTAG GLRHPSLKGRRFDVDFQSVRAEDL NT seq 975 nt NT seq  +upstreamnt  +downstreamnt atgcggctgatcgcgcccatgctggccacggccggcgcactcccggacgacccggcggaa cggccgtggagtttcgagatgaagtacgacgggtgccggatgctggcctcggtgggcggg ggccgggagccggtgctgtggacccgcgccctgaacgtggtgacaccctcgtatcccgag atcgccgaggcattgacggcagcgttcggtggccgcgggcgcatcgttctcgacggggag attgtcgtgctcgatcacggccggccctcgttcggactgctccagcggcgcctgggtgta gcccatgccacgaagccgctgcaacgtcgaatacctgtgacgtttctaccctttgacgtt ctggtgctcggcgacctggatctcatgagcgcgtcgtacctggatcggcgggcggagctg gccgtgctggattcgatcatccaggacgtcggcggccttcccatcacggtccctccgcac tgggagaatcagagcagcaagatcatgctcaatgcggcgagaagcgctggcatggagggg atcttggttaaacgatcgacctcgatctatcttccgggccagcggagcagatcctggatc aaacacgcaatccgcacgcgcagctcggttttggtgatcgggttcgtcggctcgagccgt tcggtcgcggcactgatcctcggagcgtacgacgccgagaatagattaatccaggtgggt tccgtttcttccgggctcacggtgccgatgcgccgacagctccgggaggacttccggccg ctggagcgccctagcagccctctcacggacccgtcagcagccgcggagaccttccctggg attcagtggctcactcctcggctggtcgtggacgtcgcctacagggcgcacacggccggt gggctacggcatccctctctgaagggccggcgcttcgacgtcgattttcaatcggttcgt gcggaggacctgtag

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