Rhodopseudomonas palustris CGA009: TX73_000240
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Entry
TX73_000240 CDS
T00153
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpa03016
]
TX73_000240
Enzymes [BR:
rpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TX73_000240
Transfer RNA biogenesis [BR:
rpa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TX73_000240
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WCL90171
UniProt:
Q6NDQ9
LinkDB
All DBs
Position
52495..53109
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AA seq
204 aa
AA seq
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MTIRLHRGDLPDLSRYTHSVAIDTETMGLHPHRDRLCVVQLSNGDGSADVVQIPQGATDA
PNLKKLLGDPAVVKIFHFARFDLAALYKTFGVMPQPVYCTKIASRLTRTYTDRHGLKDLV
RELLGIDLSKQQQSSDWGADSLSDAQLAYAASDVLHLHALRDRLDTMLARENRTDLAAAC
FGFLPVRARLDLDGWSEEDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgcctgcatcgcggcgacctgccggatctttcccgctatacgcattcagtg
gcgatcgacaccgagacgatggggctgcatccgcatcgcgaccggctgtgcgtggtgcaa
ttgtcgaacggcgacggcagcgccgacgtggtgcagatcccgcagggtgcgaccgatgcg
ccgaacctgaagaagctgctcggcgatccggccgtggtgaagatcttccacttcgcccga
ttcgatttggcggcgctgtacaagacgttcggcgtgatgccgcagccggtgtactgcacc
aagatcgcctcgcgcctgacccgcacctacaccgaccgtcatggcctgaaggacctggtg
cgcgaacttctcgggattgatctgtcgaagcagcagcagtccagcgactggggcgccgat
tccctgagcgacgcgcaactcgcttacgccgcctccgacgtgctgcacctgcacgcgctg
cgcgacaggctcgacaccatgctggcgcgggagaatcgcaccgatctcgccgccgcctgc
ttcggcttcctgcccgtccgtgcccgactcgacctcgacggctggagcgaagaggacatt
ttcgctcattcgtga
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