Rhodopseudomonas palustris CGA009: TX73_000345
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Entry
TX73_000345 CDS
T00153
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_000345
03036 Chromosome and associated proteins [BR:
rpa03036
]
TX73_000345
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_000345
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TX73_000345
Chromosome and associated proteins [BR:
rpa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TX73_000345
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TX73_000345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
WCL90191
UniProt:
A0AAF0BLV8
LinkDB
All DBs
Position
73388..73702
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AA seq
104 aa
AA seq
DB search
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVDALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKTVPFFKTGKEMRERLNRDSGDDAPTSDTA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatccgaactcgttcagcgtatcgccgagcacaacccgcacctgtatcagcgg
gacgtcgagaacatcgtcaacgcgatcctcgatgagatcgtcgacgcattggcgcgtggg
gatcgggttgagcttcgcggctttggcgcattctcggtgaagcatcgtccggcacgcgcc
ggacgcaatccgcgcaccggggctcatgtgccggtcgatcagaagaccgtgccgtttttc
aagaccggcaaggaaatgcgtgagcgcctgaaccgcgacagcggcgacgacgccccaacc
agcgatacagcgtaa
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