Rhodopseudomonas palustris CGA009: TX73_000905
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Entry
TX73_000905 CDS
T00153
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TX73_000905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpa03019
]
TX73_000905
Messenger RNA biogenesis [BR:
rpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
TX73_000905
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WCL90299
UniProt:
Q6NDD4
LinkDB
All DBs
Position
193548..194069
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AA seq
173 aa
AA seq
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MTSRPPIASLPYRRNVGIALFGSDGRVLIGRRFRDDGPEIILPGLEWQMPQGGIDEGEEP
RIAVMRELWEETGVTNAEMLGETDWVSYDFPPYEGPPHRLAVFRGQRQKWFALRFTGSET
EIDPLAVRNDMPPEFDSWRWERLDRVADLVVPFRREVYREVARSFARFTAAQA
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcgcgcccgcccatcgcgtccctgccgtatcgccgcaatgtcggcatcgcgctg
ttcggctccgacggcagggtcctgatcgggcgacggtttcgcgacgacggcccggagatc
atcctgccggggctcgaatggcagatgccgcaaggcggcatcgacgaaggcgaagagccg
cggatcgcggtgatgcgcgaactctgggaagagaccggcgtgaccaacgccgagatgctc
ggcgagaccgactgggtcagctacgacttcccgccctacgagggcccacctcaccgcctc
gccgtgtttcgcggccagcgccagaagtggttcgcgctgcgcttcaccggcagcgagacg
gaaatcgatccgctcgccgtccgtaacgacatgccgccggaattcgattcctggcgctgg
gagcgcctcgaccgcgtcgccgatctcgtcgtgccgttccgccgcgaggtctatcgcgag
gtggcgcggagctttgcgcggttcaccgctgctcaggcttag
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