Rhodopseudomonas palustris CGA009: TX73_001005
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Entry
TX73_001005 CDS
T00153
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpa03016
]
TX73_001005 (thpR)
Enzymes [BR:
rpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TX73_001005 (thpR)
Transfer RNA biogenesis [BR:
rpa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TX73_001005 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
WCL90319
UniProt:
Q6NDB5
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All DBs
Position
complement(217188..217727)
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AA seq
179 aa
AA seq
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MPRLFTGLEIPAEISQTLSSLRGGLPGARWVDPDDYHLTLRFIGDIDGVTANEIASTLFR
VNRKPFEVTLQGLSSFGGKKPRAVVASVVPSKPLIELQAELERLMQRVGLDPEGRKFTPH
VTLARLRGDVSSRDVADYLSIRGYFPSKVFKAERFVLYSARASTGGGPYIVEAPYELTA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgtttacgggactggagattccggccgagatcagccagaccctgtcgagt
ttacgtggcggattaccgggagcgcgctgggtcgacccggacgattatcatctcaccttg
cggttcatcggcgacatcgacggcgtcactgccaatgagatcgcctcgaccctgtttcgg
gtcaatcgcaagccgttcgaagtcaccctgcagggcctgtcgagcttcggcggcaagaag
ccccgcgcggtggttgcctcggtggtgccgtcgaagccgctgatcgagctgcaggccgag
ctcgagcggctgatgcagcgggtcgggctcgatcccgaggggcggaaattcaccccgcac
gtcaccctggcgcggctccgcggcgacgtctccagccgcgatgtcgccgactatctgtcg
atccgcggctacttcccgtccaaggtgttcaaggccgagcggttcgtgctgtattcggcc
cgcgcctcgaccggcggcggcccctatatcgtcgaagcgccttacgagctgaccgcctga
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