Rhodopseudomonas palustris CGA009: TX73_001125
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Entry
TX73_001125 CDS
T00153
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa00020
Citrate cycle (TCA cycle)
rpa00190
Oxidative phosphorylation
rpa00650
Butanoate metabolism
rpa00720
Other carbon fixation pathways
rpa01100
Metabolic pathways
rpa01110
Biosynthesis of secondary metabolites
rpa01120
Microbial metabolism in diverse environments
rpa01200
Carbon metabolism
Module
rpa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TX73_001125 (sdhA)
00650 Butanoate metabolism
TX73_001125 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
TX73_001125 (sdhA)
00720 Other carbon fixation pathways
TX73_001125 (sdhA)
Enzymes [BR:
rpa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
TX73_001125 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
WCL90343
UniProt:
Q6ND92
LinkDB
All DBs
Position
complement(242052..243875)
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AA seq
607 aa
AA seq
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MAANVNGAPAAGGNAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSH
TVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPEAVYELEHWGVP
FSRTEDGKIYQRPFGGMTMDFGKGQAQRTCAAADRTGHAMLHTMYGQALRHSAEFYIEFF
AIDLIMDDQGCCRGVVALKLDDGTIHRFKAQTTILATGGYGRAYASCTSAHTCTGDGGAM
ALRAGLPLQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAKDLAS
RDVVSRAMTIEMREGRGVGKKKDHIFLHLDHLAPEVLHERLPGISESARIFAGVDVTREP
IPILPTVHYNMGGIPTNFHGEVVTKKDGDDNAVVPGLMAIGEAACVSVHGANRLGSNSLI
DLVVFGRAAALRCAEKLVPNGKQPELPASSADMSLSRLDKYRYAKGGTPTAKLRERMQHV
MQNNCAVFRTGEVLAEGKELIANVHGSVGDVGVSDRTLVWNSDLVETLEFDNLIVQAVVT
MNSAANRTESRGAHAREDFPDRDDANWMKHTLAWIGDKGDVTIDYRPVHDYTMTNDVQYI
PPKPRVY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaacgtcaacggcgccccggcggcgggcggcaacgcctatccgatcgaggac
cacacctacgatgtcgtggtggtcggcgccggcggcgcgggtttgcgcgcggtggtcggc
tgcagcgaagcgggcctccgcaccgcctgcatcaccaaggtgttcccgacccgctcgcac
accgtggcggcccagggcggcatctcggcctcgctcggcaacatgcacaaggatgactgg
cgctggcacatgtacgacaccgtgaaggggtcggactggctcggcgaccaggactcgatc
gaatacatggtccgcaatgccccggaagccgtgtacgaactcgagcattggggtgtgccg
ttctcgcgcaccgaagacggtaagatctatcagcggccgttcggcggcatgacgatggat
ttcggcaagggccaggcgcagcgcacctgcgcggccgccgaccgcaccggccacgccatg
ctgcacacgatgtacggtcaggcgctgcgccactcggctgagttctacatcgagttcttt
gccatcgacctgatcatggacgatcaggggtgctgccgcggcgtcgtggcgctgaagctc
gacgacggcaccatccatcgtttcaaggcgcagaccaccatcctggcgaccggcggctac
ggccgtgcctacgcttcctgcacgtcggcgcacacctgcacgggcgacggcggcgcgatg
gcgctgcgcgccggcctgccgctgcaggacatggagttcgttcagttccacccgaccggc
atctacggctcgggctgtctggtgaccgaaggcgcccgcggcgagggtggctatctggtc
aactccgagggcgagcgcttcatggagcgctatgcgccgtcggccaaggatctcgcctcg
cgcgacgtcgtttcgcgcgcgatgacgatcgaaatgcgcgaaggtcgcggcgtcggcaag
aagaaggaccacatcttcctgcacctcgaccatctggcgccggaagtgctgcacgagcgg
ctgccgggcatctcggaatcggcacggatcttcgccggcgtcgacgtcacccgcgagccg
atcccgatcctgccgaccgtgcactacaacatgggcggcatcccgacgaacttccacggc
gaagtcgtgaccaagaaggacggcgacgacaacgcagtggtgccgggcctgatggcgatc
ggcgaagctgcctgcgtgtcggtgcacggcgccaaccgcctcggctccaactcgctgatc
gacctcgtggtgttcggccgcgccgcagcgctgcgctgcgccgagaagctggtgccgaac
ggcaagcagcctgaactgccggccagctccgccgacatgtcgctgtcgcggctcgacaag
tatcgctacgccaagggcggcaccccaaccgccaagctgcgcgagcggatgcagcacgtg
atgcagaacaactgcgcggtgttccgcaccggcgaagtgctcgccgagggcaaggaactg
atcgccaacgtccatggcagcgtcggcgacgtcggggtgtcggatcgcacgctggtgtgg
aattccgatctcgtcgagaccctggaattcgacaatctgatcgtccaggcggtggtgacg
atgaactccgccgccaaccgcaccgagagccgcggcgcccacgcccgcgaagacttcccg
gatcgcgatgacgccaactggatgaagcacacgctggcctggatcggtgacaagggcgac
gtgaccatcgattatcggccggtgcacgactacacgatgaccaacgacgtccagtacatc
ccgccgaagccgcgggtgtattga
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