Rhodopseudomonas palustris CGA009: TX73_001300
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Entry
TX73_001300 CDS
T00153
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa00300
Lysine biosynthesis
rpa00470
D-Amino acid metabolism
rpa01100
Metabolic pathways
rpa01110
Biosynthesis of secondary metabolites
rpa01120
Microbial metabolism in diverse environments
rpa01230
Biosynthesis of amino acids
Module
rpa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TX73_001300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TX73_001300 (dapF)
Enzymes [BR:
rpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TX73_001300 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
HpcH_HpaI
DUF2924
Motif
Other DBs
NCBI-ProteinID:
WCL90378
UniProt:
A0AAE9XVR1
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All DBs
Position
274381..275262
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AA seq
293 aa
AA seq
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MSALDNRLFAKMNGIGNEIVVVDLRDQPAPVTPADARAVAAHVPYDQLMLLQPARLSGTE
AFVRIYNNDGSESGACGNGMRCVARQMFSGSEKNGLTFETRAGLLNCWRGPADGLYTVDM
GEPKFGWQDIPLAEEFRDTRMIELQIGPIDAPVLHTPSVVSMGNPHAIFWVDDVNAYDLG
RFGPLLENHPIFPERANITLAHIVDRQHITMRTWERGAGLTKACGSAACSTAVAAARLKR
TDRTVEMTLPGGQLTIEWRESDNHVLMTGGAAFEFEGRFDPALFSGALDPTGA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggataaccgcctgttcgccaagatgaacggcatcggcaacgagatcgtg
gtggtcgacctgcgcgatcagccggcgccggtgacgccagccgatgcgcgggcggtggcg
gcgcacgtgccctatgatcagctgatgctgctgcaaccggcgcggctgtccggcaccgaa
gccttcgtccggatctacaacaatgacggctccgaatccggcgcctgcggtaacggcatg
cgctgcgtcgcgcggcagatgttttcaggcagcgaaaagaacggcctgaccttcgagacc
cgcgccggcctgctcaattgctggcggggcccggccgacggcctctacaccgtcgacatg
ggtgagccgaagttcggctggcaggacatcccgctcgccgaggaattccgcgacacccga
atgatcgaactgcagatcggcccaatcgacgcgccggtgctgcatacgccgtcggtggtc
agcatgggcaatccgcacgcgatcttctgggtcgacgatgtgaacgcctacgatctcggc
cggttcggaccgctgctggagaaccacccaatcttcccggagcgcgccaacatcacgctc
gcccacatcgtcgaccgtcagcacatcaccatgcggacctgggaacgcggcgccgggctg
accaaggcctgcggctccgccgcctgctccaccgcggtcgcggccgcgcggctgaagcgc
accgaccggacggtggagatgacattgcccggcggccagctcaccatcgagtggcgcgag
agcgacaatcacgtgctgatgaccggcggcgccgcattcgagttcgaaggccggttcgac
ccggcgctattctccggcgcgctcgacccgactggcgcctga
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