Rhodopseudomonas palustris CGA009: TX73_001505
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Entry
TX73_001505 CDS
T00153
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03030
DNA replication
rpa03430
Mismatch repair
rpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TX73_001505 (holA)
03430 Mismatch repair
TX73_001505 (holA)
03440 Homologous recombination
TX73_001505 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_001505 (holA)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_001505 (holA)
Enzymes [BR:
rpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TX73_001505 (holA)
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TX73_001505 (holA)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TX73_001505 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
XRI1_C
Motif
Other DBs
NCBI-ProteinID:
WCL90417
UniProt:
Q6ND20
LinkDB
All DBs
Position
318810..319841
Genome browser
AA seq
343 aa
AA seq
DB search
MVALRGKDATSFLARPDPGRPIVLLYGPDAGLVRERADALIAASLDDPKDPFALVRLDGD
ELSAEPSRLVDEALAIPMFGGRRAIRVRAGSRSFVAGVEALIASPPRECRIVIEAGDIKP
DNALRKACEKAATGAVAIGCYPDAEADIARLIDDELRGSNLQIAKDARAVLTTLLGGDRQ
ASRNELRKLALYAHGKGEVTLDDVITCVSDASDLKLDAIVDAAFSGKPVVVETEFAKAMV
AGTYPGQIILAAQRHAAFLHKTSLVVEGGTPAAVVLDSGFPRLHFSRKAAAETALRNLST
TRLAQIIEQLASAALETRRQATLGAAIAQRTLLSIAVSARRRS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcttcgcggcaaagatgccacctcgtttctggccagacccgatccgggccgg
ccgatcgtgctgctgtacggacctgatgcgggcctcgtgcgcgaacgcgccgatgcgctg
atcgcggcctcgctcgacgatcccaaagacccattcgcattggtccggcttgatggcgac
gaactctccgcggagccgtcgcggctggtcgacgaagccctggcgattccgatgttcggc
ggccgccgcgcgatccgcgttcgtgccggttcgcgcagtttcgtcgcgggcgtcgaagcc
ttgatcgcctcgccgccgcgggaatgccgcatcgtgatcgaggccggcgatatcaagccg
gacaacgcgctgcgcaaggcctgcgagaaagccgccaccggcgcagtcgcgatcggctgc
tatccagacgccgaagccgacattgcccggctgatcgacgacgaactgcgcggctcgaat
ctgcagatcgccaaggatgcgagggcggtgctgacgacgctactcggcggcgaccgccag
gcctcgcgcaacgaactgcgcaagcttgcgctgtacgcgcatggcaagggcgaggtcacg
ctggacgacgtgatcacctgcgtgtcggatgcgtccgacctcaagcttgatgcaattgtc
gacgccgcgttctcgggcaagcccgttgtggtcgagacagaattcgccaaggcgatggtg
gccggcacttatccgggtcagatcatccttgcggcacagcgccacgcggcgtttctgcat
aagaccagccttgtggtcgaaggcggtacgccagccgccgtggtgctcgattccggattt
ccgcggctgcatttctcccgcaaggccgcagccgagacggcgctccgcaatctctcgacg
acccgcctcgcgcagatcatcgagcaactcgcgagcgccgcactcgaaacccgccgccaa
gccacactcggcgcagcgatcgcgcagcggacgctgctatcaatcgccgtcagcgcgagg
cgccggagttag
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