Rhodopseudomonas palustris CGA009: TX73_001665
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Entry
TX73_001665 CDS
T00153
Symbol
rpaR
Name
(GenBank) HTH-type quorum sensing-dependent transcriptional regulator RpaR
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TX73_001665 (rpaR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpa03000
]
TX73_001665 (rpaR)
Transcription factors [BR:
rpa03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
TX73_001665 (rpaR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
WCL90449
UniProt:
A0AAF0BN65
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All DBs
Position
complement(349351..350082)
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AA seq
243 aa
AA seq
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MIVGEDQLWGRRALEFVDSVERLEAPALISRFESLIASCGFTAYIMAGLPSRNAGLPELT
LANGWPRDWFDLYVSENFSAVDPVPRHGATTVHPFVWSDAPYDRDRDPAAHRVMTRAAEF
GLVEGYCIPLHYDDGSAAISMAGKDPDLSPAARGAMQLVSIYAHSRLRALSRPKPIRRNR
LTPRECEILQWAAQGKTAWEISVILCITERTVKFHLIEAARKLDAANRTAAVAKALTLGL
IRL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcgaagatcagctttggggacggcgtgcgctggaattcgtcgattccgtc
gaacggctcgaggcgccggcgctgatcagccggttcgaatcgctgatcgcgagctgcgga
tttaccgcctacatcatggccggcctgccgtcgcgcaatgccggactaccggagctgacg
ctggccaatggctggccgcgagactggttcgatctgtatgtcagcgaaaacttcagcgcg
gtcgatccggtgccgcgccacggcgctaccacggttcatcctttcgtatggtccgatgca
ccctacgaccgcgaccgtgatccggccgcccaccgggtcatgacccgggcggcggaattc
ggactggtcgagggttactgcattccgctgcactacgacgacggtagcgccgcgatcagc
atggccggcaaggatccggacctcagcccggccgcgcgcggcgcgatgcagctggtcagc
atctacgcgcatagtcgcctgcgcgcactcagccggccaaagccgatccggcgcaaccgg
ctcacgccgcgcgagtgcgagatcctgcaatgggcagcgcagggcaagaccgcctgggaa
atctcggtaatcctctgcatcaccgaacgcacggtgaaattccatctgatcgaagccgcc
cgcaagctcgacgccgccaaccgcaccgcggcggttgccaaggcattgacgctcggattg
atccgtttgtga
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