Rhodopseudomonas palustris CGA009: TX73_002245
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Entry
TX73_002245 CDS
T00153
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TX73_002245 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpa03019
]
TX73_002245 (pnp)
03016 Transfer RNA biogenesis [BR:
rpa03016
]
TX73_002245 (pnp)
Enzymes [BR:
rpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TX73_002245 (pnp)
Messenger RNA biogenesis [BR:
rpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TX73_002245 (pnp)
Transfer RNA biogenesis [BR:
rpa03016
]
Prokaryotic type
tRNA degradation factors
TX73_002245 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
WCL90562
UniProt:
A0AAE9XWK0
LinkDB
All DBs
Position
complement(475920..478088)
Genome browser
AA seq
722 aa
AA seq
DB search
MFNIHSVEIDWGGRPLKLETGKVARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSH
DMENDPDVLAMVAASAALTLSGVPFKGPIGAARVGFINDEYVLNPVLDEMAETQLELVVA
GTADAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIDAIIDLAEKAAKEPRELTVVDDSE
IEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKAIAHFFPEGQEPKYDKLRIAGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNILAQVGVLPRTHGSALFTRGETQAMVVTTLGTG
EDEQYVDSLSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIAGITEEIMKVALGQAKDGRIHILGEMSK
ALDRARAELGEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGESIKAAIKWIKSIASDPEVGEIYEGTVVKVMEFGAFVNFFGAKDGLVHISQLAAGRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEAKQKAEAKAEGEAPAQAA
GE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatccattccgtggaaatcgattggggtggccgtcccctcaagcttgaaacc
ggcaaggtcgcccgccaggccgacggcgccgtcgtcgcgacctatggcgagaccgtcgtg
ctcgccaccgtggtggccgccaaggcgccgcgtgaaggcgtcgacttcctccccctcacc
gtcgactaccaagaaaaggcctacgcggccggccgcattcccggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagacgctggtctcccgtctgatcgaccgcccgatccgt
ccgctgttcgccgacggctggcgcaacgagacccaggtcatcgtcaccgttctgtcgcac
gacatggagaacgatccggacgtgctggcgatggtcgccgcctccgcggcgctgacgctg
tccggcgtgccgttcaagggcccgatcggcgccgcccgcgtcggcttcatcaacgacgaa
tacgtgctcaatcccgtgctcgacgagatggccgaaacccagctcgagctggtggtggcc
ggtaccgccgacgctgtgctgatggtcgaatccgaagccaaggagctgtcggaagagatc
atgctcggcgcggtgatgttcggtcaccgccacttccagccggtgatcgacgcgatcatc
gacctcgccgagaaggccgccaaggagccgcgcgaactcaccgtcgtcgacgacagcgag
atcgaaaaggaaatgctcggcctggtcgagcaggagctgcgtgccgcctacgccatcccg
gtcaagcaggaccgctacgccgcggtcggcaaggtcaaggagaaggcgattgcgcacttc
ttcccggaaggccaggagccgaaatacgacaagctgcgcatcgccggcgtgttcaaggag
ctcgaggccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgt
gacagcaagaccgttcgcaacatcctggctcaggtcggcgtgctgccgcgtactcacggt
tcggcgctgttcacccgcggtgaaacccaggcgatggttgtgaccacgctcggcaccggc
gaagacgagcagtatgtcgactcgctgtcgggaacgtacaaagagacgttcctgctgcac
tacaacttcccgccctactcggtcggcgagaccggccgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctggcgtggcgcgcgatccatccggtgctgccgccgcatcac
gagttcccctacaccatccgcgtcgtctcggagatcaccgagtcgaacggttcgtcctcg
atggcgtcggtgtgcggtgcctcgctggcgctgatggacgcgggtgtgccgctgaagcgg
ccgaccgcgggtatcgcgatgggtctgatcctggaaggtgagcgcttcgccgtgctgtcc
gatatcctcggcgacgaggaccacctcggcgacatggacttcaaggtggcgggcaccgag
gcgggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtggcgctcggccaggccaaggacggccgcatccatatcctgggtgagatgtccaag
gcgctcgaccgtgcccgcgccgagctcggcgaacacgcgccgcggatcgagaccttcaag
atcccgaccgacaagatccgcgaagtgatcggtaccggcggtaaggtgatccgcgagatc
gtcgaaaagactggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtggcttcg
tcggatggtgagtcgatcaaggccgcgatcaagtggatcaagtcgatcgcgtccgatccg
gaagtcggcgagatctacgaaggcaccgtcgtcaaggtgatggagttcggcgcgttcgtg
aacttcttcggcgccaaggatggtctggtgcacatcagccagctcgccgccggccgcgtg
cagaagacatccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccggctgtcgatgaaggtggtcgatcagaccaccggtgaagac
ctcgaagccaagcagaaggcggaagccaaggccgaaggcgaagcgcccgcgcaggctgcc
ggcgagtaa
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