Rhodopseudomonas palustris CGA009: TX73_003795
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Entry
TX73_003795 CDS
T00153
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa00630
Glyoxylate and dicarboxylate metabolism
rpa00680
Methane metabolism
rpa01100
Metabolic pathways
rpa01120
Microbial metabolism in diverse environments
rpa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TX73_003795 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
TX73_003795 (fdhF)
Enzymes [BR:
rpa01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
TX73_003795 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_9
Fer4_15
Fer4_6
Fer4_21
Fer4_8
Fer4_2
Fer4_18
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
WCL90867
UniProt:
Q6NBU4
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All DBs
Position
808198..811044
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AA seq
948 aa
AA seq
DB search
MALVHETDFGTPPSLSENMVTLTIDGRSVSVPEGTSIMRAAMEIGTAIPKLCATDMVDAF
GSCRLCLVEIDGRSGTPASCTTPVADGLVVHTQTERLKQIRKGVMELYISDHPLDCLTCS
ANGDCELQDMAGAVGLRDVRYGYSGEKHPNPGLDESNPYFTYDASKCIVCSRCVRACEEV
QGTFALTIAGRGFDSVVSPGMQESFLGSECVSCGACVQACPTATLNEKSVIEIGTPERSV
VTTCAYCGVGCTFKAEMRGEELVRMVPYKDGKANRGHSCVKGRFAWGYANHKERILKPMI
RGKITEPWREVSWDEAFAYAASELKRIQAKYGRDSVGGITSSRCTNEETFLVQKLIRAGF
GNNNVDTCARVCHSPTGYGLSTAFGTSAGTQDFDSVEHADVVMIIGANPTDGHPVFGSRL
KKRLRQGAKLIVVDPRRIDLVRSAHVEAAQHLPLKPGTNVAVLTALAHVIVTEGLANEAF
VRERCDWSEYEHWAAFVSDEKHSPEATAAFTGVDPQAVREAARLYATGGNGAIYYGLGVT
EHSQGSTTVMAIANLAMATGNLGRPGVGVNPLRGQNNVQGSCDMGSFPHELPGYRHISTD
AVRESFEALWNVKLDNEPGLRIPNMLDAAVEGSFKALYVQGEDILQSDPNTKHVAAGLEA
MECVIVHDLFLNETANYAHIFLPGSTFLEKNGTFTNAERRIQRVRKVMTPKNGLEDWEVT
LRLAEAVGYKMNYTHPSQIMDEIAALTPTFTGVSYDRLEELGSIQWPCNERAPEGTPVMH
IDHFVRGKGKFVITEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRTANTVWHDEDRL
EIHPHDAEQRGVRDGDWVRLASRAGETTLRALITDRVAPGVVYTTFHHPDTQANVVTTEY
SDWATNCPEYKVTAVQIAPSNGPSEWQRSYEQQAAAARRIAVPAEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtccacgaaaccgatttcggcacgccgccctcgctctccgaaaacatggtg
acgctgacgattgacggtcgcagcgtcagcgtacccgagggcacctcgatcatgcgcgcc
gcgatggagatcggcacggcgatcccgaaactctgtgccaccgacatggtcgatgcgttc
ggctcatgtcggctgtgccttgtcgagatcgatggccgcagcggcaccccggcctcgtgc
accacgccggtcgccgacggtctcgtcgtccacacccagaccgagcggttgaagcagatc
cgcaaaggcgtgatggagctatatatctccgatcacccgctcgactgcctgacctgctcg
gccaacggcgattgcgagctgcaggacatggccggcgcggtcggcctgcgcgacgtgcgc
tacggttactccggcgagaagcatcccaatccgggcctcgacgagtccaatccgtatttc
acctacgatgcgtcgaagtgcatcgtttgctcgcgctgcgtccgcgcctgcgaggaggtg
caaggcaccttcgcgctgaccatcgccggccgcggcttcgattccgtggtgtcgcccggc
atgcaggagagcttcctcggctcggaatgcgtgtcctgcggcgcctgcgtgcaagcctgc
ccgaccgcgacgctgaacgaaaagagcgtgatcgagatcggcacgccggagcgctcggtg
gtgacgacctgcgcgtattgcggcgtcggctgcaccttcaaggccgagatgcgcggcgaa
gagctggtccgcatggtgccttacaaggacggcaaggccaatcgcggccattcctgcgtc
aagggccgcttcgcctggggctacgccaatcacaaggagcgcattctcaagccgatgatc
cgcggcaagatcaccgagccgtggcgcgaggtgagctgggacgaggcgtttgcctatgcg
gcgtccgaactgaagcggatccaggcgaaatacggccgcgactcggtcggcggcatcacc
tcgtcccgctgcaccaatgaagaaaccttcctggtgcagaagctgatccgcgccggcttc
ggcaacaacaatgtcgatacctgcgcccgggtctgccactcgccgaccggctacggcctg
tcgaccgcgttcggcacctcggccggcacccaggatttcgactcggtcgagcacgccgac
gtggtgatgatcatcggcgccaacccgacggacggccatccggtgttcggctcgcgcctg
aagaagcggctgcgccagggcgccaagctgatcgtggtcgatccgcgccggatcgacctc
gttcgctcggcgcatgtcgaggccgcacagcatctgccgctcaagcccggcaccaacgtc
gcggtgctgaccgcgctggcgcacgtcatcgtcaccgaagggctggccaacgaagcgttc
gtgcgcgagcgctgcgactggagcgaatacgagcactgggcggcattcgtctccgatgag
aagcacagcccggaagccactgcggccttcaccggcgtcgatccgcaggcggtacgcgaa
gccgcgcggctgtacgccaccggcggcaacggcgcgatctattacggtctcggtgtcacc
gagcacagccagggctcgaccacggtgatggcgatcgccaatctggcgatggcgaccgga
aatctcggccggcccggcgtcggcgtgaacccgctgcgcggtcagaacaacgtgcaaggc
tcgtgcgacatgggctcgttcccgcacgagctgccgggctatcgccacatctcgaccgat
gcggtgcgcgaaagcttcgaggcgttgtggaacgtcaagctcgacaacgagcccggcctg
cgcattcccaacatgctcgacgccgcggtcgagggctcgttcaaggcgctgtacgtgcag
ggcgaggacatcctgcagtccgaccccaacaccaagcacgtcgccgccggcctcgaagcg
atggaatgcgtcatcgtccacgatctgttcctcaacgagaccgccaactacgcccacatc
ttcctgcccggttcgaccttcctggagaagaacggcaccttcaccaatgccgaacgccgc
atccagcgggtccgcaaggtgatgaccccgaagaacggcctggaagactgggaagtcacg
ctgcggctcgccgaggcggtcggctacaagatgaactacacgcatccgtcgcagatcatg
gacgagatcgcggcgctcaccccgaccttcacgggcgtgtcctatgatcgcctggaagaa
ctcggctcgatccagtggccgtgcaacgagcgcgcgccggaaggcacgccggtgatgcac
atcgatcatttcgtccgcggcaagggcaagttcgtcatcaccgaatatgtcgccaccgac
gaacgcaccgggccgcgcttcccgctgctgctgacgaccgggcgcatcctgtcgcaatac
aatgtcggggcgcagacgcggcggaccgccaatacggtgtggcacgacgaggaccggctc
gagatccacccgcacgacgccgagcagcgcggcgtgcgggacggcgactgggtgcggctc
gccagccgcgccggcgaaaccacgctgcgggcgctgatcaccgaccgcgtcgcgccgggc
gtggtctacaccacgttccaccaccccgatacccaggccaacgtggttaccaccgagtac
tccgattgggccaccaactgcccggaatacaaggtcacggccgtgcagatcgcgccgtcg
aacggcccgtcggagtggcaacgctcctacgagcagcaggcggcggccgcacggcggatt
gctgtgccggcggaggccgcggagtga
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