Rhodopseudomonas palustris CGA009: TX73_006200
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Entry
TX73_006200 CDS
T00153
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpa03000
]
TX73_006200
Transcription factors [BR:
rpa03000
]
Prokaryotic type
Helix-turn-helix
Other families
TX73_006200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
Mg_chelatase
HTH_30
HTH_23
AAA_2
HTH_28
AAA
HTH_29
AAA_16
Xre-like-HTH
HTH_1
AAA_3
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WCL91341
UniProt:
Q6NAH8
LinkDB
All DBs
Position
1318681..1320570
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AA seq
629 aa
AA seq
DB search
MSVASNRDAVVTARRRFFGEGRSVDGMLAAPILRSWQRCAGQGLDASRSPLVEPPTAREL
REFQERHDRLGRLARPELNALQGDARLTGSVVILTDAAGVVLDMIGSDEFAGRAAQVALR
PGVSWSEADTGTNAIGTALVERQPIAVHGAEHFFERHRILACAAAPLIDPRGVVAGALDM
TGPAAIRHVHALGLMRLAAEQIEHRFFTEGFEHCTMLRLHTDRALLGTPREGVLAFADGV
LVGANRHGLDLMNLDWPALDLARLETLLPGVRPSDQIQMLRGPRGTRLWGRLVDPLRRSP
RAPAASMPAAVPAAPAGEVEPILDAEMMAQLSRTVRLVEAGIPVLLLGETGSGKDVFARR
VHAESARRNKPFVPVNCAALPEGLIESELFGYEAGAFTGARRQGAPGLLRQADGGVLFLD
EIGDMPLSLQSRLLRVLQDKQISPLGGGRPVPVDFALICATHQPLGTLLAAGAFRQDLYF
RIAQYVVERPPVRHHPDRLALVRTLWRQLGGEDAGVQLSAEVERVLAAYNWPGNYRQLVG
TLRALLVLGEPGHPVEVAALPAEITAAAGAVESQVSEMLPGTSLAEQTRSVLQAALDASG
GNVSRAARRLGIDRSTYYRRLLKDKDRGR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgcatcaaaccgtgatgccgtcgtcactgcgcgccgtcgcttcttcggggaa
gggcggtctgtcgatggaatgctcgccgctccgatcctacggtcgtggcagcgctgcgcc
ggccaggggctggacgccagccgctcgccgctggtcgagccgcccaccgcccgcgaactg
cgcgaatttcaggaacgccacgaccggctcggccgcctcgcgcggccggaactcaatgct
ctgcaaggcgatgcacgtctgaccggcagtgtcgtcattctcaccgatgcggccggcgtc
gtcctcgatatgatcggctccgacgaatttgcggggcgtgcggcgcaagtggcgctgcgg
cccggcgtgtcgtggagcgaagccgacaccggcaccaatgcgatcggcacggcgctggtc
gagcgccagccgattgcagtgcacggcgccgagcacttcttcgagcgccaccggattttg
gcctgcgcggccgcgccgctgatcgatccgcgcggtgtggtcgccggtgcgctcgatatg
acaggccccgcggcgatccgccatgtccacgcgctcggcctgatgcggctcgccgccgag
cagatcgagcaccggttcttcaccgaaggattcgagcactgcaccatgctgcggctgcac
accgaccgtgcgctgctcggcacgccgcgcgaaggcgtgctggcgtttgccgatggcgtg
ctggtcggcgccaatcggcacggcctcgatctgatgaatctcgattggccggcgctcgat
ctggccaggctcgaaacgctgctgccgggcgtgcgcccctcggatcagatccagatgctg
cgcggccctcgtggcacgcggctgtggggccggttggtcgacccgctgcgccgcagccca
cgcgcgcctgcagcatcgatgcccgctgctgtgccggcggctccggccggagaggtcgag
ccgatcctcgacgcagaaatgatggcgcagctgtcgcgcaccgtgcggctggtcgaggcg
gggattccggtgctgctgctcggcgagaccggatccggcaaggatgttttcgcgcgccgc
gttcacgccgagagtgcgcggcgcaacaagccgttcgtgccggtgaattgcgcggcgctc
cccgaggggctgatcgagtcggagctgttcggctacgaggccggagccttcactggcgcg
cggcggcagggcgcgcccgggctgctgcgtcaggccgatggcggcgtgctgtttctcgac
gagatcggcgacatgccgctgtcgttacagagccggctgctgcgggtgctgcaggacaag
cagatttcgccgctcggcggtggccgtccggtgccggtcgacttcgcattgatctgcgcg
acgcaccagccgctcggcactctgctggccgccggcgcgttccgccaggatctgtacttc
cgcattgcccaatatgtcgtcgagcggccgccggtgcgtcatcacccggaccggctcgct
ctggtgcggacgctgtggcgccagctcggcggcgaagacgccggcgtgcagctctcggct
gaggtcgagcgtgtgctcgccgcctacaactggccaggcaactaccggcagctggtcgga
acgctacgcgccctgttggtacttggtgagccgggacacccggtcgaggtcgcggcactg
cccgccgaaatcaccgcggcggccggcgcggtcgagagtcaggtttccgagatgctcccg
gggacgtcgctggcggaacagacccggtcagtactgcaggccgcattggacgccagcggc
ggaaacgtatcgcgcgccgcgcgccggctcgggatcgaccgaagtacgtactatcgccgc
ctgctcaaggacaaagatcgcggccgatga
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