Rhodopseudomonas palustris CGA009: TX73_012960
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Entry
TX73_012960 CDS
T00153
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03410
Base excision repair
rpa03430
Mismatch repair
rpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TX73_012960 (recJ)
03430 Mismatch repair
TX73_012960 (recJ)
03440 Homologous recombination
TX73_012960 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_012960 (recJ)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TX73_012960 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TX73_012960 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TX73_012960 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WCL92667
UniProt:
A0AAF0BQQ4
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All DBs
Position
2850027..2851868
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AA seq
613 aa
AA seq
DB search
MTPPISVLPAETVPAFLGVTRSATGKAWRDRLDARATAKAQAMVQRYQLPEMLARVLAGR
GVEIDQVEDFLEPTIRKLMPDPASLTQMEAGAKRIADAASRGEKVAIFGDYDVDGATSSA
LLAWHLRHCGLDPLIHIPDRIFEGYGPNIDAIRMLAGKGATLLITVDCGTTSLEPLAEAR
RLGMSVVVIDHHQCGDELPDVDALINPNRPDDLSGLGHLAAVGLVLMTLVAVNRELRHRG
FWTTERPEPNLLDMLHHVALGTVADVAPLVGLNRAFVAKGLIAMRRRDHVGHTALMDVSR
LNGPPEAWHLGFMLGPRINAGGRIGRADLGVRLLLESDVSEAARIAAELDRLNSERREIE
QKAEAQAEAEAMASLGLEDKGAVIVTASEGWHPGVVGLVASRLKEKFGRPSFAIALEPGG
IGTGSGRSISGVDLGKAVRQAVHDGLLLKGGGHAMAAGVTLRKERLAEFRAWLETTLAGD
VAKSRHVNELYIDGAVSARGVTTDLAATLNRAGPFGAGNPEPIVALPAHQLIYADEVGQA
HLRLRFKAGDGAIVNGIAFRSVGQKLGNALTENRGQTLHVAGSLSVDRWQGAERVQLRVI
DVAVPDAGPTMIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcccatctccgttttgccggccgagaccgtgccggcgtttctcggcgtgacc
cgctcggccaccggcaaggcgtggcgcgaccggctcgacgcccgcgccaccgccaaagcg
caggcgatggtgcagcgttatcaattgcccgaaatgctggcgcgggtgctggccgggcgg
ggtgtggagatcgaccaggtcgaggacttcctcgagccgaccatccgcaagctgatgccc
gatccggcgtcgctgacccagatggaagccggcgccaaacggatcgcggatgccgcctcg
cgcggcgagaaggtggcgatcttcggcgactacgacgtcgacggcgcgacctcgtcggca
ctgctcgcctggcatctgcgccactgcgggctcgatcctttgatccacattcccgaccgg
atcttcgaaggctacggcccgaacatcgacgcgatccgcatgctcgccggcaaaggcgcg
acgctgctgatcaccgtggactgcggcaccaccagcctggagccgctcgcggaagcgcgg
cggctcgggatgagcgtggtggtgatcgatcatcaccaatgcggcgacgagctgccggac
gtggatgcgttgatcaatccgaaccggcccgacgacctgtccgggctcggccatcttgcc
gcggtcggcctggtgctgatgacgctggtcgcggtcaatcgcgagctgcggcatcgcggg
ttctggaccaccgagcggccggaaccgaacctgctcgacatgctccaccacgtcgcgctc
ggcacagtggcggacgtcgcgccgctggtcgggctcaaccgcgcgtttgtcgccaaaggc
ttgatcgcgatgcgccgccgcgaccatgtcggccataccgcgctgatggacgtttcgcgg
ctgaatggtccgccggaggcgtggcatctcggcttcatgctggggccgcgcatcaacgct
ggcggacgcatcggccgcgccgatctcggcgtccggctgctgctcgaatccgacgtctcg
gaggctgctcggatcgccgccgagctcgatcggctcaacagcgagcgccgcgagatcgaa
cagaaggccgaagcgcaggcggaagccgaggcgatggcctcgctcgggctggaggacaag
ggcgcagtgatcgtcacggcttccgaagggtggcaccccggcgtggtcgggctggtcgcc
tcacggctgaaggagaagttcggccggccgtcgttcgcgatcgcgctggagccgggcggc
atcggcaccggttcgggccgctcgatctccggcgtcgatctcggcaaggcggtgcgccag
gcggtgcatgacgggctgctgctgaagggcggcggtcacgccatggcggccggtgtgacg
ttgcgaaaagaacgtctggccgaattccgcgcctggctggagacgacgctcgctggcgac
gtcgccaagtcgcgccacgtcaacgagctgtatatcgacggcgcggtgtcggcgcgcggc
gtcacgacagacctggcggcgacgctgaaccgggcagggccattcggtgccggcaatccg
gagccgatcgtggcgctgccggcgcatcaactgatctatgccgacgaagttggccaagcg
catctgcggctgcgcttcaaggcgggggacggcgcgatcgtcaacggcatcgcgtttcgc
agcgtcggccagaagctcggcaacgccctgaccgagaaccgcggccagacgctccacgtc
gccggtagcctcagcgtcgaccgctggcagggcgccgagcgcgtgcagctccgcgtcatc
gacgtcgcggtgccggatgcggggccgacgatgatcaggtga
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