Rhodopseudomonas palustris CGA009: TX73_013950
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Entry
TX73_013950 CDS
T00153
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TX73_013950 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpa03021
]
TX73_013950 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_013950 (rpoZ)
Enzymes [BR:
rpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TX73_013950 (rpoZ)
Transcription machinery [BR:
rpa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TX73_013950 (rpoZ)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TX73_013950 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
DUF7159
PWD_link
Motif
Other DBs
NCBI-ProteinID:
WCL92858
UniProt:
A0AAE9XZ30
LinkDB
All DBs
Position
3063235..3063627
Genome browser
AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPLTIDRDNDKNPVVSLREIADQTISP
EDLKEELVHSLQKFVEVDEPEPDTVPLIGSAGASVDADDTEVAMERMTEEELLKGLEGLA
PPEEQPEEDE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtcaccgtggaagattgcattgacaaggtcgacaaccggttcgacctcgtc
ctgttggccgctcatcgcgcccgcatgatctcgtccggctccccgctcacgatcgatcgc
gacaacgacaagaatcccgttgtttcgcttcgcgaaattgcggatcagacgatttcgccg
gaagacctcaaggaagaactggtgcactcgctgcagaagttcgtcgaggtcgatgagccg
gaaccggataccgttccgctgattggttcggccggcgccagcgtcgatgcggacgatacc
gaagtggcgatggagcggatgaccgaggaagagctgctcaagggtctggagggcttggcg
cccccggaagagcagcccgaggaagacgaataa
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