Rhodopseudomonas palustris CGA009: TX73_014510
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Entry
TX73_014510 CDS
T00153
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03420
Nucleotide excision repair
rpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TX73_014510
03430 Mismatch repair
TX73_014510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_014510
Enzymes [BR:
rpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TX73_014510
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TX73_014510
MMR (mismatch excision repair)
Other MMR factors
TX73_014510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
WCL92968
UniProt:
Q6N616
LinkDB
All DBs
Position
3177000..3179063
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AA seq
687 aa
AA seq
DB search
MSLPAPILDGLNPEQRCAVEHGAGPAPCPPLLVIAGAGSGKTNTLAHRVAHLVVGGADPY
RILLMTFSRRAAAEMTRRVERIARKVLGDRASALSGGLHWAGTFHGIGARLLRDYAERIG
LDPGFTIHDREDSADLMNLVRHDLGFSKADSRFPAKATCLSIYSRCVNAGQPLDVVLGAN
YPWCAGWAAELKQLFAAYVEAKQRHNVLDYDDLLLYWAQVMEEPAFAEEIGSRFDHVLVD
EYQDTNALQARVLLALKPNGVGLTVVGDDAQAIYSFRAATVRNILDFPKAFDPPARVVTL
DRNYRSTQAILSAANGVIDLARERFTKNLWTDRADGARPLLVSVRDETDQARYIVERVLD
AREGGVTLKQQAVLFRTSSHSAPLELELTRRNIPFVKFGGLKFLDAAHVKDMLALLRFVQ
NPRDRVAGFRVMLLMQGVGPASAQKALDTMTAAADPLGALTALPAPPRAGADWRGFVAAV
QELRSGDAGWPAEIERALIWYAPHLDRIHEDAETRKADLVQLAQIASGYPSRERFLTELT
LDPPDATSDQAGVPTLDDDYLILSTIHSAKGQEWKQVFVLNVVDGCMPSDLGTGTSAEIE
EERRLLYVAMTRAKDDLHLVVPQRFFTHGQNAQGDRHVYAARTRFIPERLLPLFERTSWP
RVTPEAAAAAQRGPRIDINSRMRRMWT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgtccttgcccgctccgatcctcgatggcctcaatcccgagcagcgctgcgccgtcgag
cacggcgcggggccggcgccctgcccgccgctactcgtgatcgccggcgccggcagcggt
aagaccaacacgctggcgcaccgggtggcccatttggttgtcggcggcgccgacccgtat
cgcatcctgctgatgacgttctcgcgccgcgccgccgccgagatgacccgccgggtcgag
cggatcgcccgcaaggtgctcggcgaccgcgcatcggcgctgagcggcggcctgcactgg
gccggcacgttccacggcatcggcgcccggctgctgcgcgactatgccgagcggatcggg
ctcgatccaggtttcaccatccacgatcgggaagactctgccgatctgatgaacctggtc
cgccacgaccttggcttctccaaggccgacagccggtttcctgcaaaggcgacgtgcttg
tcgatctactcgcgctgcgtcaatgccggccagccgctcgatgtcgtgctcggcgccaac
tacccgtggtgcgccggctgggccgccgagctgaagcaactattcgcggcctatgttgaa
gccaagcaacgccacaacgtgctcgattacgatgacctgttgctgtactgggcgcaggtg
atggaggagccggctttcgccgaagagatcggcagccggttcgatcacgtgctggtggac
gagtatcaggacacgaacgcgctgcaggcgcgggtgctactggcactcaagcccaacggc
gtcggattgaccgtggtcggcgacgacgcccaggcgatctactcgttccgcgccgccacg
gtgcgcaacatcctcgacttcccgaaggccttcgatccgcccgcccgcgtcgtcacactg
gaccgcaactatcgctcgacccaggcgatcctgtcggccgccaacggcgtgatcgatctg
gcacgcgagcgcttcaccaagaacctgtggaccgaccgcgccgacggtgcacggccgctg
ctggtcagcgtgcgcgacgaaaccgatcaggcgcgctacatcgtcgagcgggtgctcgat
gcccgcgagggcggcgtaacgctgaagcagcaggcggtgctgttccgcacctcgtcgcat
tccgctccgctggagctcgagctgacccggcgcaacatcccgttcgtcaaattcggcggg
ctgaagtttctcgacgccgcgcacgtcaaggacatgctggcgctgctgcgcttcgtgcag
aacccgcgcgaccgcgtcgccggattccgggtgatgctgctgatgcagggtgtcggcccg
gcgtcggcgcagaaggcgctggatacaatgacggccgcggccgacccgctcggcgccctc
accgcgctgcccgccccgccgcgcgccggtgccgactggcgcggcttcgtcgccgcggta
caggagctgcgcagcggcgatgccggctggcctgcggagattgagcgggcgctgatctgg
tacgcgccgcatctcgatcgcatccacgaggatgccgaaacccgcaaggccgacctggtg
cagctcgcgcagatcgcctcgggctatccgtcgcgcgagcgcttcctcaccgaattgacg
ctcgatccgccggacgcgacctccgatcaggccggtgtaccgacgctcgacgacgattat
ctgatcctgtcgacgatccattccgccaagggccaggaatggaagcaggtgttcgtgctc
aacgtcgtcgatggctgcatgccgtccgacctcggcaccggtacctcggccgagatcgag
gaagagcggcgcctgctgtatgtggcgatgacgcgggcgaaagacgatctgcacctcgtg
gtgccacagcggttcttcacccacggccagaacgcccaaggcgaccgccacgtctatgcg
gcccgcacccgcttcattcccgagcggctgctgccgctgttcgaacgcaccagctggccc
cgcgtcacgcccgaagccgcagcggcggcgcagcgcggcccgcgcatcgacatcaactcg
cggatgcggcggatgtggacctga
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