Rhodopseudomonas palustris CGA009: TX73_014580
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Entry
TX73_014580 CDS
T00153
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TX73_014580 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_014580 (uvrA)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TX73_014580 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TX73_014580 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_25
BCA_ABC_TP_C
nSTAND1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
WCL92982
UniProt:
Q6N602
LinkDB
All DBs
Position
3190194..3193211
Genome browser
AA seq
1005 aa
AA seq
DB search
MDEVIKAKRQTPAASSRTAITIRGAREHNLKNVDVTIPRDKLVVFTGLSGSGKSSLAFDT
IYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEI
YDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPEGTRLYLLAPVVRGRKGEYRK
ELADWLKKGFQRVKIDGAFHELAEAPTLDKKFPHDIDVVVDRIVVRPDIGQRLAESFETA
LKLAEGLAVIEYADAPAAPPTAEPGQDEPADKKKKADKKVAKIHDKSGAERILFSEKFAC
PVSGFTIPEIEPRLFSFNNPYGACPECGGLGIEQHIDADLVVPDKELTLRKGAIAPWAKS
SSPYYLQTLTALGKHYKFTLDTKWKDLPKKVQNVLLHGSGDDEIKFSYEDGVRSYDTKKP
FEGVVTNIERRFRETESEWAREELGKYFSDVPCDACHGHRLKPEALCVKVGGKHIGEVSE
LSVKAAGDWFAKVPEVLNKQQNEIAVRILKEIRDRLSFLLDVGLNYLTLSRSSGTLSGGE
SQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLDTLKRLRDLGNTVIVVEHDEDAI
LLADHVLDIGPGAGVHGGHIIAQGTPAEIMRNPKSLTGKYLTGELSVPVPERRPPNHRRT
LKLVNARGNNLKNVTAEIPLGLFTCVTGVSGGGKSTLLIDTFYKAIARKLNNASEPPAPY
DRIEGLEHIDKIIDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPESKARGYEPGRFSF
NVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETLDVLFKGKSIADVLDMTI
EEAAEFFKAVPRVRETFKTLQRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKRATGRTL
YILDEPTTGLHFHDVAKLLEVLHELVAQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGG
EIVAWGPPEDIVKAPRSYTGKFLKPVLEKKGPAKALKRKADEAAE
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgatcaaggccaagcgtcagacccctgcggcctcgagccggaccgccatc
actattcgcggcgcccgcgagcacaatctcaagaacgtcgacgtcaccatcccgcgcgac
aagctggtggtgttcaccggcctgtccggctccggcaagtcgtcgctggcgttcgacacc
atctacgccgagggccagcgccgctacgtcgagtcgctgtcggcctatgcccggcaattc
ctcgagatgatgcagaagccggacgtcgaccagatcgacggcctgtcgccggcgatctca
atcgagcagaaaaccacctcgaagaacccgcgttcgaccgtcggcaccgtcaccgagatc
tacgactacatgcgcctcttatgggcgcgcgtcggcgtgccctactcgcccgcgaccggc
ctgccgatcgagagccagacggtgtcgcagatggtcgaccgcgtactggcactgccggaa
ggcacgcggctgtatctgctggcgccggtggtgcgcggccgcaagggcgagtaccgcaaa
gaactcgccgactggctgaagaagggcttccagcgcgtcaagatcgacggcgcgttccac
gagctcgccgaagcacccacgctcgacaagaaattcccgcacgacatcgacgtcgtggtc
gaccgcatcgtggtgcgccccgacatcggccaacgtctcgccgagagttttgaaaccgcg
ctgaagctcgccgaagggctcgcggtgatcgaatatgccgacgcgcccgccgcgccgccg
acagccgagcccggtcaggacgagcccgccgacaagaagaaaaaggccgacaagaaggtc
gccaagatccacgacaagagcggcgccgaacgcatcctgttctcggagaagttcgcctgc
ccggtgtccggcttcaccattccggagatcgagcccagactgttttcgttcaacaacccc
tacggcgcctgcccggaatgcggcggcctcggcatcgagcagcatatcgacgccgatctc
gtcgtgcccgacaaggagttgacgcttcgcaagggcgcgatcgcaccgtgggcgaagtcg
tcctcgccgtactacctgcagacgctgaccgcgctcggcaagcattacaagttcacgctc
gacaccaagtggaaggacctgcccaagaaggtgcagaacgtcctgctgcacggctccggc
gacgacgagatcaaattctcctacgaagacggggtgcgttcctacgacaccaagaagccg
ttcgagggcgtcgtcaccaatatcgaacgccgcttccgtgagaccgagagcgagtgggcg
cgcgaggagctcggcaagtacttctccgacgtgccgtgcgacgcctgccacggccatcgc
ctcaagcccgaggcgctgtgcgtcaaggtcggcggcaagcacatcggcgaagtctccgag
ctgtcggtcaaggccgccggcgactggttcgccaaggtgccggaggtgctgaacaagcag
cagaacgagatcgccgtccgtatcctgaaagagatccgcgaccgcctcagcttcctgctc
gacgtcggcctcaactatctgacgctgtcgcgctcgtccggcacattgagcggcggcgaa
agccagcgcatccgcctcgcctcgcaaatcggcagcggcctcaccggcgtgctctacgtg
ctcgacgagccgtcgatcggcctgcaccagcgcgacaacgcccggctgctcgacaccctg
aagcggctacgcgacctcggcaacaccgtgatcgtggtcgagcacgacgaggacgccatc
ctgctcgccgaccatgtgctcgacatcggccccggcgccggcgtccatggcggccacatc
atcgcccaaggcacgcccgccgagatcatgcgcaatccgaagtcgctgaccggcaagtat
ctcaccggcgaattgtcggtgccggtgccggaacgccggccgccgaaccatcgccgcacc
ctcaagctggtgaacgcccgcggcaacaatctgaagaacgtcaccgccgagattccgctc
ggcctgttcacctgcgtcaccggcgtctccggcggcggcaagtcgacgttgctgatcgac
accttctacaaggcgatcgcgcgcaagctgaacaacgccagcgagccgccggcaccgtac
gaccggatcgagggcctcgagcacatcgacaagatcatcgacatcgaccagtcgccgatc
ggccgcaccccgcggtcgaaccccgcgacctacaccggtgcgttcacgccgatccgcgag
tggttcgccggccttcccgagtccaaggcgcgcggctacgagccgggccggttctcgttc
aacgtcaagggcggccgctgcgaggcatgccagggcgacggcgtcatcaagatcgagatg
cacttcctgcccgacgtctacgtcacctgcgatgtttgcaaaggaaagcgctacaaccgc
gaaacgctcgacgtgctgttcaagggcaagtcgatcgccgatgtgctcgacatgacaatc
gaggaagccgccgagttcttcaaggcggtgccgcgcgtccgcgagaccttcaagacgctg
cagcgcgtcggcctcgactatatccatgtcggccagcaggccaccacgctgtccggcggc
gaagcccagcgcgtcaagcttgccaaggagctgagcaagcgcgccacgggacgtaccctc
tacattctcgacgagccgaccacgggcctacattttcacgacgtcgccaagctgctcgaa
gtgctgcacgagctggtggcacagggcaatacggtggtggtgatcgagcacaatctcgaa
gtcatcaaaaccgccgactgggtcatcgacctcggccccgaaggcggcgacggcggcggc
gaaatcgtcgcctggggcccgccggaagatatcgtcaaagcgccgcggagctacaccggc
aagtttctgaagccggtgctggagaagaaggggccggcgaaggcattgaagaggaaggcg
gacgaggcggcggagtaa
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integrated database retrieval system
