Rhodopseudomonas palustris CGA009: TX73_015150
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Entry
TX73_015150 CDS
T00153
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03030
DNA replication
rpa03430
Mismatch repair
rpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TX73_015150 (dnaE)
03430 Mismatch repair
TX73_015150 (dnaE)
03440 Homologous recombination
TX73_015150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_015150 (dnaE)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_015150 (dnaE)
Enzymes [BR:
rpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TX73_015150 (dnaE)
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TX73_015150 (dnaE)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TX73_015150 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
T2SSK
HROB
Smaco_capsid
Motif
Other DBs
NCBI-ProteinID:
WCL93094
UniProt:
Q6N5Q0
LinkDB
All DBs
Position
complement(3306166..3309621)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSNAGFVHLHVHSAYSLLKGSMKIAKLAELAKADRQPALALTDTDNMFGGLEFSDKLSGY
GIQPIVGLELGIDFGDQDPNSRHGALATPARIVLLAAREQGYRSLMRLNSRAFLETPVNQ
VPHVKLEWLEGETDGVVALTGGPDGPISLAMLTDPALAAQRCERLQQAFGDRLYVELQRH
GTEAERRAEGGLIDLAYDKGLPLVATNEPHFASTEDYEAHDALLCIASGKLIAETDRIQF
TPDHRFKTRAEMAVLFADLPEALASTVEIAQRCAYRPLTRKPILPLFTVGASVSDAAEAA
AAEAAELRRQAEQGLAKRLSVHGLSPGTTEEDYNKRLAFELDVITRMKYAGYFLIVSDFI
KWAKAHGIPVGPGRGSGAGSLVAYSLTITDLDPIRFGLLFERFLNPERVSMPDFDIDFCQ
DRRGEVIEYVQHRYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQVDKLTKLVPQNPA
APITLKQAIEGEPKLQAARDEDPIVARAFDIAQKLEGLTRHASTHAAGIVIGDRPLSDLV
PLYRDPKSDMPVTQFNMKWVEPAGLVKFDFLGLKTLTTLDVAVKLLKQRDIHVDLHTLPI
DDAPSYQMLARGDVVGVFQVESAGMRRALIDMRPDRFEDIIALVALYRPGPMANIPTYCA
RKHGDEEPEYLHPMLEPILKETFGVIIYQEQVMQIAQVMAGYSLGDADLLRRAMGKKIRA
EMDKQRAIFVEGAVKNGVAKDAADTIFDLLAKFADYGFNKSHAAAYALVSYHTAYMKAHY
PVEFLAASMTLEIHNTDKLSEFRAEAQRLGIKVEAPSVNRSGATFEVGPNTIFYALAGLK
GVGMQAVQQIVEARGDRPFTSLADFSARVNPRAINKRVIECLAAAGAFDCLDSNRARVFG
GADAIVAACQRNHEAATSGQNDMFGGLSDAPSIILPQLEPWLPAERLRREYDAIGFFLSG
HPLDDYATALKRLRVQSWAEFCKAVKSGATAGKVAATVVSRMERRTKTGNKMGIIGLSDP
TGHFEAVLFSEGLAQYREVLEPGAAVLMQLGAELQGEDVRARVLHAEPLDAAAAKTQKGL
RIFLRDTKFLDSVVKRLQPPETKVAGGNIALVLRLDPQTEVEFDIPGRYHVSPQIAGAIK
AVTGVEHVETL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgccggattcgtccatctgcacgtccactcggcctattcgctgctgaaaggc
tcgatgaagatcgccaagctcgcggagttggcgaaggccgaccgccagccggcgctggcc
ctcaccgacaccgacaacatgttcggcgggctggaattctccgacaagctgtcgggctac
ggcatccagccgatcgtcgggctcgaactcggtatcgacttcggcgaccaggatccgaac
tcccgccacggtgcgctggcgacaccggcgcggatcgtgctgctggcggcgcgcgagcag
ggctatcgcagcctgatgcggctgaactcgcgggcgttcctggaaacaccggtcaaccag
gtaccacacgtcaagctggagtggctcgagggcgagaccgacggcgtggttgcgctgacc
ggcgggccggatgggccgatttcgctggcgatgctgaccgatccggcgctcgccgcgcag
cgctgcgagcggctgcagcaggcattcggcgatcggctctatgtcgaattgcagcgtcat
ggcaccgaggccgagcgccgcgccgaaggcgggctgatcgatctcgcctatgacaagggc
ctgccgctggtcgcgaccaacgagccgcatttcgccagcaccgaggactacgaagcgcac
gacgcgctgttgtgtatcgcatccggcaagctgatcgccgaaaccgatcgcattcagttc
acgcccgatcaccggttcaagacccgcgccgagatggcggtgctgttcgccgacctcccc
gaggccctggcatcgacggtggagatcgcacagcgctgcgcctaccggccgctcacccgc
aagccgatcctgccgctgttcactgtcggcgccagcgtcagcgacgcggcggaagcggcc
gctgccgaagcggccgagctgcgccgccaggccgagcagggcctcgccaagcggctcagc
gttcacggcctgtcgccggggacgaccgaggaggactacaacaagcggctcgccttcgag
ctcgacgtcatcactcgcatgaaatacgcgggctacttcctgatcgtttcggacttcatc
aaatgggccaaggcccatggcattccggtcggtccgggccgtggttcgggcgccggctcg
ctggtggcgtattcgctgacgattaccgacctcgatccgatccggttcggcctgctgttc
gagcgcttcctcaatccggaacgcgtgtcgatgccggacttcgatatcgacttctgccag
gatcgccgcggcgaagtaatcgagtatgtgcagcatcgctatggtcgcgatcaggtggcg
cagatcatcaccttcggtaccctgcaggcgcgcggtgtgctgcgcgacgtcggccgcgtg
ctgcagatgccgtacggccaggtcgacaagctgaccaagctggtgccgcagaatccggcg
gcgccgatcaccctgaaacaggcgatcgaaggcgagccgaagctgcaggcggcgcgcgac
gaggacccgatcgtggcgcgcgcgttcgacatcgcgcagaagctcgaaggcctgacccgc
cacgcctcgacccacgcggccggcatcgtgatcggcgatcgcccgctcagcgacctggtg
ccgttgtatcgcgatccgaaatccgacatgccggtgacccagttcaatatgaaatgggtc
gaaccggcgggcctggtgaagttcgacttcctcggcctgaagacgctgacgacgctcgac
gtcgcggtgaagctgctgaagcagcgcgacatccatgtcgacctgcacacgctgccgatc
gacgacgcgccgagttatcagatgctggcccgcggcgatgtcgtcggcgtgttccaggtg
gaaagcgcgggcatgcggcgggcgctgatcgacatgcgccccgaccggttcgaagacatc
atcgcgctggtggcgctgtatcggccgggcccgatggccaacatcccgacctactgcgcc
cgcaaacacggcgacgaggagcccgaatatctgcatccgatgctggagccgatcctgaag
gagacgttcggcgtcatcatctaccaggaacaggtgatgcagatcgcgcaggtgatggcc
ggctactcgctcggcgacgccgacctgctgcgccgcgcgatgggtaagaagatccgcgcc
gagatggacaagcagcgcgcgatttttgtcgaaggcgcggtgaagaacggcgtcgccaag
gacgcggccgacactatcttcgaccttttggcgaagttcgccgactacggcttcaacaag
agccacgcggccgcctatgcgctggtgtcgtaccacaccgcctacatgaaggcgcactat
ccggtggaattcctcgccgcgtcgatgacgctggaaatccacaacactgacaagctgtcg
gaattccgcgccgaggcgcagcggctcggcatcaaggtcgaggcgccgtcggtcaatcgt
tcgggcgccaccttcgaggtcggcccgaacacgatcttctacgcgctcgccggcctgaag
ggcgtcggcatgcaggcggtgcagcagatcgtcgaggcgcggggcgatcggccgttcacc
tcgctcgcggacttctccgcgcgggtcaatccgcgcgccatcaacaagcgcgtcatcgaa
tgtcttgccgccgccggtgcgttcgactgcctcgattccaaccgcgcccgcgtgttcggc
ggcgccgacgcgatcgtcgcggcctgccagcgcaatcatgaagccgccaccagcggccag
aacgacatgttcggcggcctgtcggacgcgccatcgatcatcctgccgcagctcgagccg
tggctgccggcggaacgcctgcgccgcgaatacgatgcgatcggcttcttcctgtcaggc
catccgctcgacgactacgccaccgccttgaagcggctgcgggtgcagtcctgggcggaa
ttctgcaaggcggtgaaatccggcgccaccgccggcaaggtcgccgccacagtggtgtcg
cggatggagcggcgcaccaagaccggcaacaagatgggcatcatcggcctgtcggatccg
accgggcatttcgaggcggtgctgttttcagaaggtctggcgcaatatcgcgaggtgctg
gagccaggcgccgcggtgctgatgcagctcggcgccgaactccagggcgaagacgttcgc
gcccgcgtgctgcatgccgaaccgctcgatgccgcggcggcgaagactcagaagggcctg
cgcatcttcctccgcgacaccaagttcctcgactcggtcgtcaagcggctgcagccgccc
gagaccaaggtggcgggcggcaacatcgcgctggtgctgcggcttgatccgcagaccgag
gtcgagttcgatattcccgggcgctaccacgtgtcgccgcaaattgccggtgcgatcaag
gcggtgacgggcgtcgagcacgtcgaaacgctgtga
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integrated database retrieval system
