Rhodopseudomonas palustris CGA009: TX73_015310
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Entry
TX73_015310 CDS
T00153
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_015310
03036 Chromosome and associated proteins [BR:
rpa03036
]
TX73_015310
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_015310
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TX73_015310
Chromosome and associated proteins [BR:
rpa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TX73_015310
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TX73_015310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WCL93125
UniProt:
Q6N5M1
LinkDB
All DBs
Position
3338657..3338968
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AA seq
103 aa
AA seq
DB search
MAKKAVAKSATPATVTLKHLAAALAEEHELSKKQTEAILGDMVTRITKHLKKGERIRIVG
LGILQVRKRAARMGRNPATGEQIQIKASKKVAFRAAKELKEAI
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagcagttgccaaatccgcgacgccggcgacggtgaccctgaagcatctc
gcagcggcgctcgcggaagagcacgagctgtcgaagaagcagaccgaagccattttgggc
gacatggtgacccgcatcaccaagcacctgaagaagggcgagcgcatccgcatcgtcggc
ctcggcatcctccaggttcgcaagcgcgccgcccgcatgggccgcaacccggccaccggc
gagcagatccagatcaaggcctccaagaaggtggcgttccgcgccgccaaggaactcaag
gaagcgatctga
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