Rhodopseudomonas palustris CGA009: TX73_016155
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Entry
TX73_016155 CDS
T00153
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_016155 (topA)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_016155 (topA)
Enzymes [BR:
rpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TX73_016155 (topA)
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Topoisomerases
TX73_016155 (topA)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TX73_016155 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WCL93289
UniProt:
Q6N559
LinkDB
All DBs
Position
3529874..3532609
Genome browser
AA seq
911 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDADFQMIWEVDPKAAS
RLNDIAKALKGADKLILATDPDREGEAISWHVLEVMKQKRALKDQQVERVVFNAITKQSV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ETEIEKFVPREYWSLIATMATPRGETFEARLVGADGKKIQRLDIGTGAEAEDFKKAIEAA
NFRVATVEAKPARRNPYAPFTTSTLQQEASRKLGFAPAHTMRVAQRLYEGVDIGGETVGL
ITYMRTDGVQIDSSAITQARKVIAEDFGNAYVPDAPRQYTAKAKNAQEAHEAIRPTDLSR
RPSDVSRNLDSDQARLYELIWIRTVASQMESAELERTTVDIEAKAGSRVLELRATGQVVK
FDGFLAAYQEGRDDDSEDEDSRRLPAMSENEALKREALAVTQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVRLEKKRLHGEDKGRVVVAFLESFFTRYVEYDFTAGL
EEDLDRISNNEVSWKQVLSDFWRDFIGAVDEIKDLRVAQVLDVLDEMLGPHIYPAREDGG
DPRQCPSCGTGKLNLKAGKFGAFVGCSNYPECRYTRPLASDSAGDADRVLGTDPDSGLEV
AVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPKGTSPSDVDLEMALKLLALPREVGKHPET
GQPIKAGIGRFGPYVQHEKTYASLEAGDDVHTIGLNRAVTLIAEKVAKGPSKGRFGSDPG
KALGDHPSLGAVAVKKGRYGAYVTAGGVNATIPNDKTEDTITLPEAIALLDERAAKGGGK
AKKAPAKKAAAKKASADGEAKPVKKAAAKKAKPKAEGAAASKARAPVAAKTAAKKAAKPK
DAAKSSAAKNG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgtcattgtcgagtcgcccgcgaaggccaagacgatcaacaaatatctcggc
tcgtcctacgaggttctggcctcgttcgggcacgtgcgcgacttgccggcgaagaacgga
tcggtcgacccggacgccgacttccagatgatctgggaagtcgatccgaaagccgcgagc
cggctcaacgacatcgccaaagctttgaagggtgccgacaaactgatcctcgccaccgac
cctgatcgcgagggcgaggcgatctcctggcatgtgctggaggtgatgaagcagaagcgt
gcgctgaaagaccaacaggtcgagcgcgtcgtgttcaacgccatcaccaagcagtcggtc
accgacgcgatgaagcacccgcgccagatcgatggtgcgctggtcgacgcctatatggcg
cgccgcgctctcgactacctggtcgggttcaccctctccccggtgctgtggcgcaagctg
cccggcgcccgctccgccggccgggtgcagtcggtggcgctgcggctggtgtgcgaccgc
gagacggaaatcgagaagttcgtcccccgcgagtattggtcgctgatcgctaccatggcg
acaccacgcggcgagaccttcgaggcccgcctggtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgccgaggcggaagacttcaaaaaggcgatcgaagcggcg
aacttccgcgtcgccaccgtcgaagccaagccggctcgccgcaacccctacgcccccttc
accacctcgacgctgcagcaggaggccagccgtaagctcggcttcgcgccggcgcacacc
atgcgggtggcgcagcggctgtatgaaggtgtcgacatcggcggcgagaccgtcggactc
attacatatatgcgtaccgacggcgtgcagatcgactcgtccgccatcacccaggcgcgc
aaggtgatcgccgaggatttcggcaacgcctatgtgccggacgcaccgcggcaatacacc
gccaaggccaagaacgcgcaggaagcccacgaagcgatccgcccgaccgacctgtcgcgc
aggccctccgacgtcagccggaacctcgattccgaccaggcccggctgtacgagctgatc
tggatccgcaccgtcgccagccagatggaatccgccgagctcgagcgcaccaccgtcgac
atcgaggcgaaagccgggtcgcgggtgctggagctgcgcgccaccggccaggtggtgaaa
ttcgacggcttcctcgccgcctatcaggaaggccgcgacgacgattccgaggacgaggac
tcccgccgcctccccgccatgagcgagaacgaggcgctgaagcgcgaggccctcgcggtc
acgcagcatttcaccgagccgccgccgcggttctccgaagcgtcgctggtgaagcggatg
gaagagctcggcatcggccggccctctacctacgcctcgatcctgcaggtgctgaaggat
cgcggctacgtccggctggaaaagaagcggctgcacggcgaggacaagggccgcgtcgtc
gtcgcgttcctggagagcttcttcacccgctacgtcgaatacgacttcaccgcgggactc
gaagaagacctcgaccgcatctccaataatgaagtgtcctggaaacaggtcctgagcgac
ttctggcgcgacttcatcggcgcggtcgacgagatcaaggacctgcgcgtcgcccaggtg
ctcgacgtgctcgacgagatgctcggcccgcacatctatccggcgcgcgaggacggcggc
gatccgcggcagtgcccgagctgcggcaccggcaagctcaacctgaaagccggcaagttc
ggcgccttcgtcggctgctcgaactatccggaatgccgctacacccggccgctcgcctcc
gacagcgccggcgacgccgaccgcgtgctcggcaccgatcccgacagcggtctcgaagtc
gcagtgaagtccggccggttcgggccctacattcagctcggcgaggccaaggactacgcc
gagggcgagaagccgaagcgggccgggattccgaagggcacctcgccgtccgacgtcgat
ctcgaaatggcgctgaagctgctggcgttgccgcgcgaagtcggcaagcacccggagacc
gggcagccgatcaaggccggcatcggccggttcggaccctatgtgcagcacgaaaagacc
tatgccagcctcgaagccggcgacgatgttcacacgattggtctcaatcgcgcggtgaca
ctgatcgccgagaaggttgcgaagggcccgagcaagggccggttcggctccgatccgggc
aaggcgctcggcgatcatccaagcctcggtgcggtcgcggtcaagaagggccgctacggc
gcttacgtcaccgccggcggcgtcaatgctacgattccgaacgacaagaccgaagacacc
atcaccctgcccgaagcgatcgcgctgctggacgagcgcgccgccaagggcggcggcaaa
gccaagaaggcgccggccaagaaggctgctgccaagaaggcttccgccgacggtgaggcc
aagccggtgaagaaggccgccgccaagaaggcgaagccgaaggccgaaggcgccgccgcc
agcaaggcgcgcgcaccggtggcggcaaagaccgcggcgaaaaaggccgccaagcctaaa
gacgcggccaagagcagcgccgccaagaacggatag
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