Rhodopseudomonas palustris CGA009: TX73_020650
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Entry
TX73_020650 CDS
T00153
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa00541
Biosynthesis of various nucleotide sugars
rpa01100
Metabolic pathways
rpa01250
Biosynthesis of nucleotide sugars
Module
rpa_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
TX73_020650 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rpa01005
]
TX73_020650 (rfaD)
Enzymes [BR:
rpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
TX73_020650 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rpa01005
]
Core region
TX73_020650 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WCL94170
UniProt:
Q6N2R4
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All DBs
Position
complement(4507590..4508570)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNLVAALNEAGRADVAVSDFLGHDGKWKNLAKRQLADFVPPAELADWL
KGRKLDAVFHMGAISATTATDGDMVMENNFRLSLRLLDWCTETGTPLIYASSAATYGDGE
HGFDDDFSLVALKQLRPMNLYGWSKHLFDLVVAERLAKGDKLPPQWAGLKFFNVFGPNEY
HKDTMASVLARRFDDIKSGRVVQLFKSHREGISDGDQRRDFIYVDDVVRVMMWLFASPSV
SGIFNVGTSHARSFRDLILAAYAALGTPPQIEYIDMPEQIRGSYQYFTQSEGDRLRAAGY
NGGFTPLEEAVASYVTGYLDRSDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtcaccgggggcgccgggttcatcggatcgaatctggtcgcggcgctgaac
gaggccgggcgggccgacgtggccgtgtccgatttcctcggccatgacggcaaatggaaa
aaccttgccaagcgtcagttggccgatttcgtgccgccggcggaactcgccgactggctg
aagggccgcaagctcgacgctgtcttccacatgggcgcgatctccgcgaccaccgccacc
gacggcgacatggtgatggagaacaatttccggctatcgctgcggctgctcgactggtgc
accgagaccggcacgccgctgatctacgcctcgtccgcggcgacctatggcgatggcgaa
cacggcttcgatgacgatttctcgctggtcgcgctgaagcagctgcggccgatgaatctg
tacggctggagcaagcatctgttcgacttggtggtagcggagcgcttagccaagggcgac
aagctgccgccgcaatgggccggcttgaaattcttcaacgtgttcggcccgaacgagtat
cacaaggataccatggccagcgtgctggcgcggcggttcgacgacatcaagtccggccgg
gttgtgcagttgttcaagtcgcaccgagaaggcatctccgacggcgaccagcgccgcgac
tttatctatgtcgacgacgtcgtgcgggtgatgatgtggctgttcgcttcgcccagcgtc
agcggcatcttcaacgtcggcaccagccatgcccggagcttccgcgacttgatcctggcc
gcctatgcggcgctcggcacgccgccgcagatcgagtacatcgatatgccggaacagatt
cgcggcagctatcagtatttcacccagagcgagggcgaccggctgcgtgccgctggctac
aatggcggcttcaccccgctcgaagaggcggtcgcgtcttacgtcacaggttacctcgac
cgcagcgatcgcttccgctga
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