Ruminiclostridium papyrosolvens: P0092_00415
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Entry
P0092_00415 CDS
T08965
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rpay
Ruminiclostridium papyrosolvens
Pathway
rpay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P0092_00415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpay03400
]
P0092_00415
Enzymes [BR:
rpay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P0092_00415
DNA repair and recombination proteins [BR:
rpay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P0092_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
PhoH
nSTAND3
AAA_22
UvrD-helicase
T2SSE
OB_YrrC
DEAD
AAA_29
AAA_23
SMC_N
AAA_16
Ribosomal_S13
FtsK_SpoIIIE
NPHP3_N
nSTAND_NTPase5
NACHT
Motif
Other DBs
NCBI-ProteinID:
WES34474
LinkDB
All DBs
Position
87928..90330
Genome browser
AA seq
800 aa
AA seq
DB search
MATGQFQQQRWSFDSYPVGTALSIIGRFDYKIYENADNGYKIYTFEIERIIDEDGFEHEA
QDLISVTGYYEVNDHCAVLPCKIVGTVGVYKGEKQLKADTVEFIEPATDEGIITFLSCGI
IKGVGEKTARNIVVGYKSGSSFVEGFGSNTLEIIKNEPLSLVKIKGISADKARLIHDSYM
ENMEYQNVMIFFQKFGVSSAKAMKIYNTFKGTAIAIAEQNPYMFTNIKGFGFRTCDEIAK
KLGIDSHSIFRMEAALKSVLETAETEGHCYLYRQQLLQATSKALSDNADKISEDELDEAY
KRMIKTGLLVNITYTENEDRYEAVYTRDMHKLEYETALAIKNIVRCQPDISVAHVDKLIA
EFEELKGFELEDMQKESVRAVFETNMLILTGSAGSGKTTTVECMIYVLQRVFENRQEMSF
MLAAPTGKAAKRLTEITGFEAMTIHRLLQFSYENKGFFYRQGNELPYDLIVIDESSMLSI
DLAHALFTAISPGTTVVMIGDTQQLPSVGAGNVLDDMIKSGVIPTVKLNVIKRQADGSGI
ISNANRIINGEMPEIINQNKDFFVIEEDDKYRVVKKTQEALNRLMTAYNHTIDDIQIICP
QKSSEIGTYELNKAIQEMVNPAAENKQEIKRGNSVFREGDKVIHLSNNYETPHYRREPDT
GRYFAQESCGIFNGDIGRIIEISNIKEVEAEDEDANTPEKKVAVQYDDFIIIYHINELEE
IDLAYCLTVHKMQGSQCEAAIILCHMRNYVMLNRNLGYTAVTRAKKMACIIGQKKAIKLM
VSNVKINERNSMLCDLLKIG
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacaggacaatttcaacagcaaagatggtcattcgacagttaccctgtggggaca
gcgttaagcattattggccgttttgactataaaatatatgaaaatgcagataatggatat
aaaatctatacttttgaaatagaaagaattattgatgaggatggatttgaacatgaggct
caggatcttataagtgtaaccggatattatgaggtgaatgaccattgtgcggttttgcca
tgtaaaattgtcggtaccgtgggagtatacaaaggtgaaaagcaacttaaggctgatact
gtagaatttattgaacctgctaccgatgaaggaataataacctttctgtcatgcggaata
attaagggcgtgggagaaaaaacagcaagaaatattgttgtaggctacaaaagtggttcg
agctttgttgagggctttggtagcaataccttggagattataaaaaacgaacccctgtct
ctggtaaagataaaaggcatttctgctgataaggctaggcttatccacgattcttatatg
gaaaacatggaataccagaacgtcatgattttctttcaaaaatttggggtatcatcagct
aaggccatgaagatatataatacttttaaaggaacagctatagccattgccgagcagaac
ccatatatgtttaccaatataaagggctttggatttagaacctgtgacgaaatagcaaaa
aaactgggaatagattcccattccatattcagaatggaagccgccttgaaaagtgtactg
gaaacagctgaaacagaagggcattgttacttatacagacaacagcttttacaggcaact
tcaaaagctttaagtgataatgcagataaaatcagcgaggatgaactggacgaagcctac
aagagaatgataaaaacaggacttcttgtgaatataacatatacagaaaatgaagacaga
tatgaggctgtttatacaagggatatgcacaagcttgaatacgaaactgcacttgccata
aaaaatatagtgaggtgccagcctgatattagcgtagcacatgttgataagttgatagct
gaatttgaagagttaaagggctttgaacttgaagacatgcaaaaggaatctgtcagagca
gtttttgaaacaaatatgctgattctcacgggttctgcgggaagtggaaaaaccactact
gtagaatgtatgatatatgtgctgcaaagagtttttgaaaatcgtcaggaaatgagtttt
atgctggcagcacctacaggaaaggctgctaaaagacttacggaaataactggttttgaa
gcaatgactatacaccggcttctgcaattttcctatgaaaataaaggatttttttacaga
cagggtaacgaactgccttacgaccttatagtaattgatgaaagcagtatgcttagcata
gatttggctcatgcgttgtttactgccatttcaccgggaacaacagtagttatgattggt
gatactcagcagctaccttctgtaggtgccggaaatgtactggatgatatgataaaaagc
ggagtaatacctacagtcaagttaaatgttataaaacgacaggcagacgggtccggcatt
atttcaaatgcaaacaggattataaacggtgaaatgcctgaaataataaatcaaaacaag
gatttctttgtaattgaagaagatgacaaatacagggttgtcaaaaagactcaggaggca
ttaaacaggcttatgacagcctataaccatacaatagatgacattcagataatttgtccc
caaaaatcttctgaaatcgggacgtacgaattaaataaagccatacaggagatggttaat
cctgctgcagaaaataaacaggaaataaaaagaggaaatagtgttttcagagaaggagac
aaagttattcacctaagcaataattacgagactccacattatcgtagagaacctgatacc
ggaagatattttgcgcaagagagttgtggaatttttaacggagatatcggcaggattatt
gaaatatccaatataaaggaagttgaagctgaggatgaggatgcaaacacccctgaaaag
aaagttgcggttcagtatgatgattttattataatttatcatataaatgaacttgaggag
atagatttggcatattgcctgaccgttcacaaaatgcaggggtctcaatgcgaagctgct
attatactatgtcatatgagaaactatgtcatgcttaacagaaaccttggatatacagcc
gttacgagagcaaaaaaaatggcgtgtattatagggcaaaagaaggcaataaaattaatg
gtttcaaatgttaaaattaatgaaagaaattcaatgctgtgtgaccttttaaagatagga
tag
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