Ruminiclostridium papyrosolvens: P0092_00720
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Entry
P0092_00720 CDS
T08965
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
rpay
Ruminiclostridium papyrosolvens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
MCP-like_PDC_1
HTH_58
HAMP
Motif
Other DBs
NCBI-ProteinID:
WES34534
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Position
complement(152902..155187)
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AA seq
761 aa
AA seq
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MMKNYSIIVKLMIVLSLFIIIPLITITFIFNYGIMKYSEDEIGRSGLGKLDSARSVTDLL
TQTINNESLHLSLDETLNKLYGMDDINEAIKDSDNNLMLYQFVSKLSDIVRTNNAYSSVY
LYLDNSNYIATNSGVYPKDNFPDDTWLKSYIKSKERGDPLSWTNPRPSDANGSSSVISYI
FPLTYTTNLKGSITINVYESRLSNLINSNNYDVGDFISVINSKGEVISSVDKTILNKNLS
KVSYISKVLNSSVDRGHFIESINGKRFLITYLKTGAQNWTFVGVFSLNTLTTKVNSLKMS
IIYITIFLLVLFVLLSYVISRRLFNPVKKLVQEIKSRKGIDIIGNGNEFTLLSKTFDAMI
KQEDQLFRTIEKDHKNLRENYLLSLLRGKPSITEDEMHLFPLKNILCCVIYIDKYTDFAS
NFSYEHQYYLKSVILNLSEEKVGETYMCSGVVLDGDKVVLIINFHDEDLITVTSVLKNAF
SIVQKEAAKVIETTISVCLGGIYHDILNIRNSYNEAQNLIKQRFIRGHEAFVYQKEEISD
ANKYFYPFNIEKQIFNNIDIGSKDSLLISLTCFFDEIKQNKNISYDNVMLILNQLLGNTI
KYLLDLNISVSKVFGNDFNVYSKLAEIETLDEASLFLSNIYLQIIEYNEKFKVEGKTHIM
KILDYIHENYKKDIAINTLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLLRQ
TNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRSIKAN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaattattcaataattgtgaaattaatgattgtgctttctctttttataatt
atacctcttattacaattacctttattttcaattatgggataatgaagtactctgaagat
gaaataggccgttccggtcttggtaagcttgattccgcaagaagcgttaccgatcttctg
actcagactattaataatgagagccttcacctgtctttggatgaaactcttaacaaattg
tatggcatggatgatataaatgaagccattaaggacagcgataacaatttaatgctgtat
cagtttgtatcaaagttatccgacattgtcagaaccaataacgcctactcttcggtgtac
ttgtacttagataattcaaactatatagcaacaaacagtggcgtgtatcccaaggataac
tttcccgatgatacctggcttaaatcctatataaaaagcaaagagcggggagatccgtta
tcctggacaaacccaagaccatccgatgccaatggcagcagctcggttatatcgtatata
ttccctttaacctatactactaatcttaaggggtctattaccataaatgtgtacgaaagc
aggctaagcaatcttattaacagtaataattacgacgttggagattttataagcgttata
aattcaaagggtgaagttatatcctctgttgataaaaccattcttaataagaacttgtca
aaggtttcatatatttcaaaggttctaaacagcagcgttgacagaggacattttatagaa
agcataaacggcaaaagatttcttattacatatcttaaaaccggagctcaaaactggaca
tttgtaggtgttttttcactgaataccctgactaccaaggtaaattcactgaaaatgtca
ataatttatataacaattttcttgctggtgctttttgtacttctgtcctatgtaatttca
cgcagattgttcaatcctgtaaagaaactggtacaggaaatcaagtccagaaaaggtatc
gacattataggaaacggaaatgagtttactcttttgtctaaaacctttgatgctatgata
aagcaagaagatcagctgttccgcaccattgaaaaggatcataaaaatctccgtgaaaat
tatttacttagccttttaaggggaaaaccctcaatcacagaagacgaaatgcatcttttc
cccttgaagaacatcttgtgctgtgtgatatatattgataaatacactgatttcgcatcg
aacttctcgtatgagcatcagtattatcttaaatcagtaatactgaacctgtcggaagaa
aaggtaggtgaaacatacatgtgctcaggtgttgttttagatggagacaaggtagttctt
attataaatttccacgatgaggacttaataacggttacttccgtactgaaaaatgctttc
tccattgttcagaaggaagcggcaaaagtaatagaaacaaccatatccgtttgtctcggg
ggtatttaccatgacattctgaatataaggaattcgtataatgaagcgcagaatctcata
aaacaaagatttatccggggacacgaagcttttgtataccaaaaggaagagatttctgac
gccaacaagtatttctatccttttaacatagaaaaacagatattcaacaacattgatatt
ggctcaaaagactcactcttgatttctctaacctgtttctttgatgaaattaagcaaaac
aaaaacatcagctatgataatgttatgcttatactgaaccagttactcggaaacaccatt
aagtatttgcttgatttaaacatcagtgtcagcaaggtttttggaaatgactttaatgta
tacagtaagcttgcagaaattgaaactctggacgaagcgagtttgttcctttcaaatatt
tatttgcagatcatcgagtataatgaaaagttcaaagttgaaggtaaaactcatattatg
aaaattttggactatattcatgagaattacaaaaaagatattgcaattaatactcttgcg
gaacatgtgggtcttagctactcccacgtaagaaaaatatttaatgatgagacaggtgag
aatattgttaactatattaataacatgagaattgaagaagcacagcggctactgcggcaa
acaaacatgaatattaatgatattgcacttagtctgggatataacaataagcagagcttc
aacaggttctttaagaaatatgtaggtattaaccccggagagtacagaagtataaaggca
aattaa
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