Ruminiclostridium papyrosolvens: P0092_12030
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Entry
P0092_12030 CDS
T08965
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rpay
Ruminiclostridium papyrosolvens
Pathway
rpay00470
D-Amino acid metabolism
rpay00550
Peptidoglycan biosynthesis
rpay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpay00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P0092_12030 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
P0092_12030 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpay01011
]
P0092_12030 (murD)
Enzymes [BR:
rpay01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
P0092_12030 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpay01011
]
Precursor biosynthesis
Amino acid ligase
P0092_12030 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
DUF5659
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WES32495
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All DBs
Position
complement(2717383..2718780)
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AA seq
465 aa
AA seq
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MNNKLEQFKKDVKNKKVAVMGIGISNIPLIKYLVSFGVDITAFDKSSEEKLADAFTQLEG
LPVKYSIGSDYLSKLNGFDLIFRTPGMRPDLPELVQAVNNGAELTSEMEVFLKLCPAQVF
AVTGSDGKTTTTTLIYKILSEEGYNCWLGGNIGIPLLSKIDEVAETDKVVLELSSFQLMT
IRDCPSVAVVTNLSPNHLDVHKSLQEYIDAKKNIFIYQKENEKLVLNYDNEITKSFNYEA
RGEHVYFSRLSNLEEGVVYQDGVIMVKKGNESTVIVEGDKIKIPGVHNIENYMAATAATI
DYVKPETIAKIATTFNGVEHRIELVRELNGIKFYNSSIDSSPSRTIAALKTFKNKVILIA
GGKDKGIPYDSIGEIIAEKVKCLLLIGATASRIEEAYKNYLQQRDIDNEIEIIHCDSYEE
VVKEAYGQAKSGDCIILSPASTSFDMFKNFEHRGNVFKELVNKLK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaataataagctggaacagttcaagaaggacgttaaaaataaaaaagttgcggttatg
ggaataggtataagtaatattccattgattaaatatctcgttagttttggagtagatata
actgcatttgataaatcatctgaagaaaaactcgcagatgctttcactcaattagaggga
ttgcctgttaaatatagtattggctctgattatctttccaagttgaatggttttgatttg
atattccgtacgcccggaatgagacctgatctgccggagcttgttcaagcagtgaataat
ggtgccgagcttacatcagaaatggaagtgtttttaaaattgtgtccggcacaggttttt
gcagtaaccggaagtgacggaaaaacaactactacaaccttgatctataaaatactttca
gaggaaggctacaattgctggcttggaggaaatataggtataccgctgctaagtaaaata
gatgaggttgccgaaacggacaaggtagttttggaactaagcagcttccaattaatgacc
ataagagactgtccgtcagttgcagttgtaacaaacctttctccaaatcatcttgatgtt
cataaatcattgcaagagtatattgatgcaaaaaagaacatttttatttatcagaaggaa
aatgagaagcttgttctgaattatgataatgaaattacaaagagtttcaattatgaggct
cgtggtgaacatgtttatttctcaagattaagtaatctggaagaaggtgttgtatatcaa
gatggtgtgataatggtcaaaaaaggaaatgaaagtactgtaattgtagagggtgataaa
ataaagatacccggggttcataacatagaaaattacatggctgcaactgcagcaactata
gactatgttaaaccggagaccatcgcaaagattgcaactacgtttaatggtgttgaacac
agaattgaattggtaagggagctaaatgggataaaattctacaatagttccattgacagc
agcccttcaagaacaatagcggcactaaaaacctttaagaataaagtaatccttattgcc
ggaggaaaggataaggggataccctatgattcaataggtgaaattattgctgagaaggta
aagtgcctgctgctgataggcgcaactgcttcaagaattgaggaagcatacaagaactat
ttacaacaaagagacatagataatgagatagaaatcattcattgtgacagctatgaagag
gttgtaaaagaagcctatggacaggcaaagtccggtgactgtataattttgtcgcctgca
agcacaagctttgatatgtttaaaaactttgaacaccgtggaaatgtgtttaaagaattg
gttaacaagcttaaatag
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