Ruminiclostridium papyrosolvens: P0092_17220
Help
Entry
P0092_17220 CDS
T08965
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rpay
Ruminiclostridium papyrosolvens
Pathway
rpay00521
Streptomycin biosynthesis
rpay00523
Polyketide sugar unit biosynthesis
rpay00525
Acarbose and validamycin biosynthesis
rpay00541
Biosynthesis of various nucleotide sugars
rpay01100
Metabolic pathways
rpay01110
Biosynthesis of secondary metabolites
rpay01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rpay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
P0092_17220 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
P0092_17220 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
P0092_17220 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
P0092_17220 (rfbB)
00525 Acarbose and validamycin biosynthesis
P0092_17220 (rfbB)
Enzymes [BR:
rpay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
P0092_17220 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
adh_short_C2
Portal_T4
DUF4304
Motif
Other DBs
NCBI-ProteinID:
WES33489
LinkDB
All DBs
Position
complement(3848929..3849951)
Genome browser
AA seq
340 aa
AA seq
DB search
MKTYLITGGAGFIGSNYIRYMLKNHKDIFIINVDKLTYAGNTDNLTGALINDANYKFYCC
DICDKDKIEEIFRTHKIDYVVNFAAESHVDRSMTNTKEFIETNITGTVNLMNVARKAWEI
RDNEYIDGVRFLHISTDEVYGSCTECCTEESPLNPHNPYSCSKAAAEFYVKCYWDAYRFP
VNITRSSNNYGPNQYPEKLIPLMIHNTMENLKLPVYGDGMQMRDWIYVEDNCSAIDLVLH
EGQPGEVYNIATEKKYHNRFVVDKILTYIKGEVREDMIRHVQDRKASDLCYSINTRKIRE
KLGWSPSVDFDKGLDKTIEWYLDNRNWIHKSLLGGEKVRP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttatctaataacaggcggtgcgggattcataggttctaattatataagatat
atgttaaaaaatcataaagatatttttataattaatgtagacaagctcacttatgcggga
aacacggataatttgacaggagctttaattaatgacgcaaactacaagttttattgctgt
gatatttgtgataaagacaaaatagaagaaatattcagaacacataaaattgactatgta
gtcaattttgccgcagagagtcatgtagaccgttccatgaccaacacaaaggaatttatt
gaaacaaatataacgggaacagtaaacttgatgaatgttgccaggaaagcgtgggaaatc
agagataacgaatatattgatggagtcaggttccttcatatatccacagatgaggtatat
ggctcctgtactgaatgttgtaccgaagaatctcctttgaacccacataatccatattcc
tgcagcaaggcagccgctgaattctatgtaaaatgctattgggatgcctacaggtttcct
gtcaatattactcgaagctctaacaattacggtccgaatcaatacccggaaaagctgatt
ccgctaatgatacataataccatggagaaccttaaacttccggtatatggtgacggtatg
caaatgagagattggatatatgtggaggacaactgctctgcaatcgacttggttttacat
gaggggcaacccggtgaagtttacaatatagccacggagaaaaaatatcataatagattt
gtggtagataaaattttaacgtatataaaaggcgaagttcgtgaagatatgattcggcat
gtacaggacagaaaggcatcagacctttgctacagcatcaatactcggaaaatacgggaa
aaattggggtggagcccttccgtagatttcgataaagggcttgataaaaccatagagtgg
tatctggataacagaaactggatacacaagtctcttttgggcggggagaaggttcgtcca
tga
DBGET
integrated database retrieval system
