Ruminiclostridium papyrosolvens: P0092_21300
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Entry
P0092_21300 CDS
T08965
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rpay
Ruminiclostridium papyrosolvens
Pathway
rpay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0092_21300 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpay03021
]
P0092_21300 (rho)
03019 Messenger RNA biogenesis [BR:
rpay03019
]
P0092_21300 (rho)
Transcription machinery [BR:
rpay03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P0092_21300 (rho)
Messenger RNA biogenesis [BR:
rpay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P0092_21300 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA
S1CSD-TOTE-2
LAGLIDADG_1
Motif
Other DBs
NCBI-ProteinID:
WES34261
LinkDB
All DBs
Position
complement(4846144..4848219)
Genome browser
AA seq
691 aa
AA seq
DB search
MDQINLQSKTLEDLRYIAKMLGMKNISKYKKSELVELLSENSKKLKSDDIVEEVVSEETK
KAEPATNTIETQASEERSKEALEEVPVLRKSRRGRPSKASKSMDKPEDTGVSDLITNVTT
QDNQGKNPNSVSEQSEKPDRLSDTLKHLETKNIEKKPHSRGRKKDVQPSGEPQVTENKVL
PNTTNTSDVSTREKENNSAENIPHRKNNRLKPEQTIEQPKNISDEKISGKVEKDSKPQIY
RKDDQPSTRQDNRQQHRQVRPYTNTNGKSDISSEPQRMPLNQQPQQVQPQQPTPSQPQVI
SPQIQQPQGSEKIESDDPVEGVLEVLPDGYGFLRSENYLSGPKDVYVSPSQIRRFGLKTG
DKLRGKGRIPKEGEKFQALLYVQSINGDTPDVASKRVAFEYLTPIYPDNRITLETAPREF
STRLIDLIAPIGKGQRGMIVSPPKAGKTILLKKIANAITINYPEAELIVLLIDERPEEVT
DMQRSIKGEVIYSTFDEVPEHHIKVAEMVLERAQRLVEQKKDVVILLDSITRLARAYNLT
IPPTGRTLSGGLDPGALHKPKRFFGAARNIENGGSLTIMATALIETGSRMDDVIFEEFKG
TGNMELHLDRKLSEKRIFPAIDINKSGTRREELLLSQKELESVWAIRKAMSNMGTAEVTE
ILINKLMQTRTNDDFVNSIKISFLDKNSQDR
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaattaatttacagtcaaaaacgttagaagatttgagatatattgcaaaaatg
ctgggaatgaaaaatatatccaaatataagaagagtgagttagtagaactgcttagtgaa
aactccaaaaaacttaaatctgatgatattgtggaagaagttgtttctgaagaaactaaa
aaggctgaaccagctacgaatacaatagaaactcaagcaagcgaagaaaggtccaaagaa
gcattagaggaggttcctgtcttaagaaaatcccggagaggaaggccgagcaaggcatca
aaatcaatggacaagccggaagataccggggtatcagatttaattactaacgttacaact
caggataatcagggtaaaaatccaaattccgtatcagaacaaagtgaaaaaccagacaga
ttgtctgacacattaaagcatctggaaacaaaaaatatcgagaagaagcctcatagcaga
ggacggaaaaaggatgttcagccttctggcgaacctcaggttactgaaaataaagtatta
cctaatacaacaaacacatcagatgtttcaacgcgagaaaaagaaaacaattcggcagaa
aacataccacacaggaaaaacaacagattaaagccggagcaaactatagaacagccaaaa
aacatttctgatgaaaagatatcggggaaagttgaaaaggattcgaaacctcagatatac
agaaaagatgatcagccttcaacaaggcaggataatagacaacagcacaggcaagtcaga
ccatatactaacacaaacggtaagtctgacatctcatcggaaccgcagcgtatgccatta
aatcagcagccacagcaggttcagcctcagcaaccgacaccatcccagcctcaggttatt
tcacctcagattcaacaaccgcaaggtagtgaaaaaatagaaagtgatgatcctgtagag
ggagttcttgaagtattaccggacggttatggctttttgagaagcgaaaactatttgtcc
ggccctaaggatgtttatgtttcaccttcacaaataagacgttttggtcttaaaacaggt
gataaactcaggggaaaaggcaggattccaaaagaaggcgaaaaatttcaggcgttatta
tacgtacagtcaattaacggagacactcctgacgttgcgtctaagagagttgcctttgag
tacttaacacctatatatcctgataacagaattactcttgaaactgcacccagagaattt
tcaacaaggcttatagatcttatagctccaattggaaaaggccagagaggaatgattgta
tctcctcctaaagccggtaaaacaatacttttgaaaaaaattgcaaatgcaattacaatc
aattaccccgaagccgagctaatagtgctgcttattgacgaaagacctgaagaagtaacc
gacatgcagcgttcaattaagggagaggtaatatattctacctttgacgaggttccggaa
catcatataaaggttgcggagatggtgctggaaagagctcagcgtcttgtagagcagaag
aaagatgttgtcattctactagatagtataacaagattggcaagagcgtataaccttact
attcctccaacaggaagaacattatcgggaggtttggaccccggtgctcttcataagcca
aagagatttttcggagcggctagaaatatagaaaatggcggcagcttgacaataatggct
actgcacttattgaaacaggaagcagaatggatgatgttatctttgaagaattcaaaggt
acaggtaacatggaattgcatctggacagaaagttatctgaaaagagaattttccctgca
atcgacattaataagtcaggaaccagacgtgaagagcttcttctcagtcaaaaagagctt
gaaagtgtctgggctataaggaaggcaatgagtaatatgggaactgcagaggttacagag
attttaataaacaaacttatgcagaccagaacaaacgatgattttgtaaatagtattaaa
atatcttttttagataagaactcgcaggacagatag
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