Rhodopseudomonas palustris HaA2: RPB_0226
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Entry
RPB_0226 CDS
T00321
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPB_0226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpb02000
]
RPB_0226
Transporters [BR:
rpb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RPB_0226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
HTH_33
Motif
Other DBs
NCBI-ProteinID:
ABD04937
UniProt:
Q2J3M3
LinkDB
All DBs
Position
254956..256557
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AA seq
533 aa
AA seq
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MKRFGSALVLAAMIAAAGVIGPARAESVVRYGISMADIPLTTGQPDRGAGAYQFTGYTIY
DPLVAWEMNVADRPGKLVPGLATEWKVDESDKTKWRFTLRKGVKFHDGSDFNADAVIWNL
DKVLNEKAPQFDKRQSAQVKTRLPSVKSYAKIDDSTIEITTKAVDSFFPYQMLWFLVSSP
AQYDKVGKDWDKFAAQPSGTGPFKLTKLVPRELAELTRNADYWDKARLPKTDKLVLVPMP
EALTRTNALLAGQVDLIETPAPDAVPQLKSAGMKLVDNVTPHVWNYHLSVLPGSPWTDVR
LRKALNLAIDRDAVVGLMNGLAKPAVGQVDPSSPWFGKPTFKIKYDLAEAKRLVKEAGYS
PEKPLKAKFIIATGGTGQMLSLPMNEFLQQSFKEIGIDVEFKVVELEVLYTAWRKGAADE
SMAGITANNIAYVTSDPLYAIVRFFHSGQVAPVGVNWGGYKNPKVDALIDEAKTNFDPVK
QDELLAQAHAQIVDDAALVWVVHDTNPHALSPKVKSFVQAQHWFQDLTTIGLQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatttggaagtgcgttggtgctggccgcgatgatcgcagccgcgggcgtcatc
gggcccgcgcgtgcggaatcggtggtgcgttacggcatctctatggcggacattccgctc
accaccggccagcccgatcgcggcgcaggtgcctatcaattcaccggctatacgatctac
gatccgctggtggcctgggagatgaatgtcgccgatcggcccggcaagctggtgcccggc
cttgcgaccgaatggaaagtcgacgagtccgacaagaccaaatggcgctttactctgcgc
aagggcgtcaagttccacgacggcagcgacttcaatgccgacgcagtgatctggaatctc
gacaaggtgctcaacgaaaaggcaccgcagttcgacaagcggcagagcgcgcaggtcaag
acccggcttccgtcggtaaagagttacgccaagatcgacgattcaaccatcgagatcacc
accaaggcggtcgactccttcttcccctatcagatgctctggttcctggtgtcgagcccg
gcgcaatacgacaaggtcggcaaggactgggacaagttcgcggcgcagccgtcgggcacg
ggtcccttcaagctcaccaagctggtgccgcgcgaactcgccgagctgaccaggaacgcc
gactattgggacaaggcgcggctgccgaagaccgacaagctcgtgctggtgccgatgccc
gaagcgctcacccgcaccaacgcgttgctcgccggccaggtcgatctgatcgagacgccc
gcgcccgatgccgtgccgcagctcaaatcggccggcatgaagctggtcgacaatgtcacg
ccgcatgtctggaactatcacctcagcgtgctgcccggctcgccgtggaccgatgtccgt
ctgcgcaaggcgctgaatctcgcgatcgaccgcgacgccgtggtcgggctgatgaacggc
ctcgccaagccggcggtcggccaggtcgatccgtcgagcccgtggttcggcaagccgacc
ttcaagatcaaatacgacctcgccgaggccaagcggctggtgaaggaagccggctactcg
ccggagaagccgctgaaggccaagttcatcatcgccaccggcggcaccggccagatgctg
tcgctgccgatgaacgagttcctgcagcagagcttcaaggagatcggcatcgacgtcgag
ttcaaggtggtcgaactcgaagtgctgtacaccgcgtggcgcaagggcgcggccgacgag
agcatggccggcatcaccgccaacaatatcgcctatgtgacgtccgatccgctctacgcg
atcgtgcggttcttccactccggacaggtggcgccggtcggcgtcaattggggcggctac
aagaaccccaaggtcgacgcgctgatcgacgaggcgaagaccaacttcgatccggtcaag
caggacgagctgctggcgcaggcgcatgcccagatcgtcgacgacgcggcgctggtctgg
gtggtgcacgacaccaacccgcacgcgctgtcgccgaaggtgaagagcttcgtgcaggcc
cagcactggttccaggacctgaccacgatcgggctgcaatag
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