Rhodopseudomonas palustris HaA2: RPB_0359
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Entry
RPB_0359 CDS
T00321
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00300
Lysine biosynthesis
rpb00470
D-Amino acid metabolism
rpb01100
Metabolic pathways
rpb01110
Biosynthesis of secondary metabolites
rpb01120
Microbial metabolism in diverse environments
rpb01230
Biosynthesis of amino acids
Module
rpb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPB_0359
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPB_0359
Enzymes [BR:
rpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPB_0359
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Motif
Pfam:
DAP_epimerase
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
ABD05070
UniProt:
Q2J390
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All DBs
Position
401137..402018
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AA seq
293 aa
AA seq
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MSALDNRLFAKMNGIGNEIVVVDLRDQPAPVTPDDARAVAAHVPYDQLMLLQPARLPGTE
AFVRIYNNDGSESGACGNGMRCVARQLFAGSDQQGLTFETRAGLLNCWRGPAEGLFTVDM
GAPKFGWQDIPLAEEFRDTRGIELQIGPIDAPILHTPSVVSMGNPHAIFWVDDIHAYDLG
QFGPLLENHPIFPERANITLAHIVDRQHITMRTWERGAGLTRACGSAACATAVAAARLRR
TDRIVEMTLPGGKLTIEWREGDDHVLMTGGAELEFEGRFDPALFVGACDTTAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggacaatcgccttttcgccaagatgaacggcatcggcaacgagatcgtc
gtggtcgatctgcgcgaccagcccgcgccggtgacgccggacgatgcccgcgcggtggcg
gcgcatgtgccttatgatcaactgatgttgctgcagccggcgcggctgcccggcaccgaa
gccttcgtccggatctacaacaatgacggctccgaatccggcgcttgtggcaacggcatg
cgctgcgtcgcgcggcagctgttcgccggctccgaccagcagggcctgaccttcgagacc
cgcgccggcctgctcaattgctggcgcggccccgccgagggcctgttcaccgtcgacatg
ggcgcgccgaaattcggctggcaggacattccgctcgccgaggaattccgcgacacccgc
ggcatcgaactgcagatcggcccgatcgacgcgccgatcctgcacacgccctcggtggtc
agcatgggcaatccgcatgcgatcttctgggtcgacgacatccacgcctacgatctcggc
caattcggaccgctgctggagaatcacccgatctttccggagcgcgccaatatcacgctc
gcccatatcgtcgatcgccagcacatcacgatgcggacctgggagcgcggcgccgggctg
acccgcgcctgcggctcggccgcctgcgccaccgcggtcgccgccgcgcggctgcggcgg
accgaccgaatcgtcgagatgacgctgccgggcggcaagctcacgatcgaatggcgcgag
ggcgacgatcacgtgctgatgaccggcggcgccgagctcgaattcgagggccggttcgat
ccggcgctgttcgtcggcgcgtgtgacacgaccgccgcctga
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