Rhodopseudomonas palustris HaA2: RPB_0848
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Entry
RPB_0848 CDS
T00321
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03030
DNA replication
rpb03410
Base excision repair
rpb03420
Nucleotide excision repair
rpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPB_0848
03410 Base excision repair
RPB_0848
03420 Nucleotide excision repair
RPB_0848
03440 Homologous recombination
RPB_0848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpb03032
]
RPB_0848
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_0848
Enzymes [BR:
rpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPB_0848
DNA replication proteins [BR:
rpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RPB_0848
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RPB_0848
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPB_0848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABD05559
UniProt:
Q2J1V1
LinkDB
All DBs
Position
complement(965253..968351)
Genome browser
AA seq
1032 aa
AA seq
DB search
MPKSPSKAAAAPAANSPAPAAAKAPGTGDHIFLVDGSSYIFRAYHALPPLTRKSDGLQVN
AVLGFCNMLWKLLREMPPDNRPTHLAIIFDKSEHTFRNQLYPDYKAHRPPAPDDLIPQFA
LIREAVRAFDLPCLEQSGFEADDLIATYVREACERGATATIVSSDKDLMQLVTDCVTMYD
TMKDRRIGIAEVIEKFGVPPEKVVEVQALAGDSVDNVPGVPGIGIKTAAQLINEYGDLDT
LLARAGEIKQPKRREALIENAEKARISRQLVLLDDKVKLDVPLDELAVHEPDARKLISFL
KAMEFTTLTRRVADYSQIDPSDVEAEAALKSSPLPLAGEVGARSATGGGTSTGGDLFSGQ
VPSPQPSPAGGRGSAPHSAEGGPLNAGRGRDGQPGEVLSPQILAAKRAEAARKIPVDRTA
YKTVRTRDELQGWIARIHDAGAFAVDAIATSIDPMQAELCGIALSLGPNDACYIPLGHRQ
TGDGSGLFAAGLAPDQLGARDVLDALRPLLDSAGLAKIGFNIKFTAVLLAQHGVTLRNID
DVQLISYVLDAGRGSHGLDALSESNLGHTLHVLGALTGSGKAKIAFDQVPIDRATEYGGE
RSDVALRLWRVLKPRLVAERMMAVYETLERPLVGVLARMERRGISIDRQVLSRLSADFAQ
TAARIEAEIRELAGEDINIGSPKQLGDILFGKMGLPGGSKTKTGAWSTSAQVLDELAEQG
HEFPRKILDWRQVSKLRSTYTDALPTYVHPQTQRVHTTYALAATTTGRLSSNEPNLQNIP
VRTEDGRKIRRAFVATPGHRLVSADYSQIELRLLSEVADVPALRKAFQDGIDIHAMTASE
MFGVPVEGMPSDIRRRAKAINFGIIYGISAFGLANQLGIPREEAGAYIKRYFERFPGIRA
YMDETRDFCRTHGYVETLFGRKCHYPDIKASNPSIRAFNERAAINARLQGSAADIIRRAM
VRMEDALAEKKLAAQMLLQVHDELIFEVPEDEVTATLPVVSHVMQDAPFPAVILNVPLQV
DARAADNWDEAH
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatccccctcgaaagccgccgcggcgcccgccgcaaactcccctgccccggcc
gccgccaaggcgccgggcacgggcgatcacatcttcctggtcgacggatcgtcctacatc
ttccgcgcctatcacgcgctgccgccgctgacccgcaagtcggacgggctgcaggtcaac
gccgtgctcggcttctgcaacatgctgtggaagctgctccgcgagatgccgccggacaac
cggccgacgcatctggcgatcatcttcgacaaatccgagcacaccttccgcaaccagctc
taccccgactacaaggcgcaccggccgccggcgccggacgatctgatcccgcaattcgcc
ctgatccgcgaggcggtgcgggcgttcgacctgccgtgcctcgaacaatccggcttcgag
gccgacgatctgatcgccacctatgtgcgcgaggcctgcgagcgcggcgccacggctaca
attgtttcgtccgacaaggatttgatgcagctcgtgaccgattgcgtcacgatgtacgac
accatgaaggaccgccgcatcggcattgccgaggtgatcgagaaattcggcgtgccgccc
gagaaggtggtcgaagtgcaggcgctggccggcgacagcgtcgacaacgtgccgggcgtg
cccggcatcggcatcaagaccgcggcccaactgatcaatgaatatggcgacctcgacacg
ctcttggcgcgcgccggcgaaatcaagcagccgaagcggcgcgaggcgctgatcgagaac
gccgagaaggcgcggatctcgcggcaactggtgctgctcgacgacaaggtgaagctcgac
gtcccgctcgacgaactcgccgtgcacgagcccgacgcgcgaaagctgatctcgtttctc
aaggcgatggaattcaccacgctgacgcggcgggtcgcggactactcccagatcgatccg
tccgacgtcgaggccgaagccgcgctgaagtcttcacctctcccgcttgcgggggaggtc
ggcgcgcggagcgcgacgggtgggggcacgtccacaggcggagaccttttttcggggcaa
gtgccctcaccccaaccctctcccgcaggcgggagagggagcgcgccgcattcggcggaa
ggtggtcctctgaatgccggccgcggccgcgacggccagccgggcgaggtgctgtcgcca
cagatcctcgccgccaagcgcgccgaagccgcgcgaaaaattccggtcgatcgcaccgca
tacaagaccgtgcgcacgcgcgacgagctgcagggctggatcgcgcgcatccacgacgcc
ggcgccttcgcggtcgatgcgatcgcgacctcgatcgatccgatgcaggcggagctgtgc
ggcatcgccttgtcgctcgggccgaacgacgcctgctacatcccgctcggccatcgtcag
accggcgacggaagcggtctgttcgccgcaggattggcgcccgaccagctcggcgcgcgc
gatgtgctcgatgcgctgcggccgctgctggactccgcaggcctcgccaagatcggcttc
aacatcaaattcaccgcggtgctgctggcgcagcacggcgtcaccttgcgtaacatcgac
gatgtgcaactgatctcctatgtgctcgatgccggccgcggcagccacggtctggatgcg
ctgtccgaaagcaatctcggccacaccctgcacgtgctcggcgcattgaccggcagcggc
aaggcgaagatcgcgttcgatcaggtgccgatcgaccgcgccaccgaatatggcggcgag
cgctccgacgtcgcactccggctgtggcgcgtgctgaagccgcggctggtcgccgagcgg
atgatggcagtgtacgagacgctggagcggccgctggtcggcgtgctggcgcggatggag
cggcgcggcatctcgatcgatcgccaagtgctgtcgcgattgtccgccgacttcgcccag
accgccgcaaggatcgaggcagagatccgcgaactcgccggcgaggacatcaacatcggc
agtccgaagcagctcggcgacatcctgttcggcaagatgggcctgcccggtggcagcaag
accaagaccggcgcgtggtcgacctcggcgcaggtgctcgacgagctcgccgaacaaggg
cacgaattcccgcgcaaaattctcgactggcgccaggtctcgaagctgcgctcgacctac
acggacgcgctgccgacctatgtgcatccgcagacccagcgcgtccacaccacctacgcg
ctcgccgccaccaccaccgggcggctgtcgtcgaacgaacccaatctgcagaacatcccg
gtgcgcaccgaggacggccgtaaaatccgccgcgccttcgtggcgacgcccggccacaga
ctggtctcggccgactactcgcagatcgaattgcgcctgctgtccgaagtcgccgatgtg
ccggcgctgcggaaagcgtttcaggacggcatcgacattcatgcgatgacggcgtccgaa
atgttcggcgtgccggtcgagggcatgccgtcggacatccgccgccgtgcgaaagcgatc
aatttcggcatcatctacggcatctcggcgttcggcctcgccaatcagctcggcatcccg
cgcgaggaggccggcgcctatatcaagcgctatttcgagcgcttcccgggcatccgcgcc
tatatggacgagacccgcgatttctgccggacgcacggctatgtcgagacgctgttcggc
cgcaaatgccactacccggacatcaaggcctcgaacccgtcgatccgcgccttcaacgaa
cgcgccgccatcaatgcgaggctgcaaggctccgccgccgacatcatccgccgcgccatg
gtgcggatggaggacgcgctggccgagaagaagctggcggcgcagatgctgctgcaggtg
cacgacgaactgatcttcgaagtgccagaggatgaagtgacggcgacgctgccggtggtg
agccacgtcatgcaggacgcgccgttcccggccgtgatcctcaacgtgccgctgcaggtc
gacgcaagagccgcggacaattgggacgaggcgcattga
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