Rhodopseudomonas palustris HaA2: RPB_1560
Help
Entry
RPB_1560 CDS
T00321
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00061
Fatty acid biosynthesis
rpb00071
Fatty acid degradation
rpb01100
Metabolic pathways
rpb01212
Fatty acid metabolism
rpb02024
Quorum sensing
rpb04146
Peroxisome
Module
rpb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPB_1560
00071 Fatty acid degradation
RPB_1560
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPB_1560
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPB_1560
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpb01004
]
RPB_1560
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpb04147
]
RPB_1560
Enzymes [BR:
rpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPB_1560
Lipid biosynthesis proteins [BR:
rpb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPB_1560
Exosome [BR:
rpb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPB_1560
Exosomal proteins of breast cancer cells
RPB_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_9
Motif
Other DBs
NCBI-ProteinID:
ABD06270
UniProt:
Q2IZU0
LinkDB
All DBs
Position
complement(1758035..1759966)
Genome browser
AA seq
643 aa
AA seq
DB search
MMDYAGRVAAADTFPKLLRLNAREFGEQIALREKSLGLWRVFTWADYQSRVHDFALGMIE
LGLGRGDVIGIIGDNRPDWVSAEIATHAIGAMSLGLYRDVLDEEAAYLLTYGEAKLVFAE
DEEQVDKLLLLAERVPNLKHIVYSDPRGMRKYDDPRLLPADTLAAMGRARAAREPGIYDR
LVDATGGEDVAILCTTSGTTAHPKLAMLAAGRVLKHCATYLSFDPKGPDDEYVSVLPLPW
IMEQVYALGKGLLCRMKVNFVEEPDTMMNDFREIAPTFVLFAPRVWEGIAADVRARVMDA
SPLKQRLYETGMKAGLAALAEGKHSAFADAVLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTELLGAYTLHRADAVDPDTTGVAMGAEIEIKVENPDVQGIGEIV
VRHPNMYLGYYKNEEASKADMQDGWMQSGDAGYFNAAGQLVVIDRIKDLAETSHGEKFSP
QYIENKLKFSPYVAEAVVLGAGRDRLAAMICIRYSIISKWAEKKRIGFTTYSDLASRPEV
YEMLRSEVESVNATLPPAQRIARFLLLYKELDADDGELTRTRKVRRSVINEKYADIIDGI
YGGRSEIPVDTQIQFQDGTTQRIRTTLKVVDLASGHAHAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggactatgccggccgcgtcgcggcagccgatacgtttccgaagctgctgcggctg
aatgcgcgagagttcggcgaacagatcgccttgcgcgaaaaatcgctcggactgtggcgt
gtcttcacctgggccgactaccagagccgggtgcacgatttcgcgctcggcatgatcgag
ctcgggctcggtcgcggcgacgtcatcggcatcatcggcgacaaccggccggactgggtg
tccgccgagatcgccacgcacgccatcggcgcgatgagcctcgggctgtatcgcgacgtg
ctcgacgaggaagccgcctatctcctgacctatggcgaggccaagctggttttcgccgag
gacgaggagcaggtcgacaagctgctgctgctcgccgagcgggtgccgaacctcaagcac
atcgtctattcggatccgcgcgggatgcgcaaatacgacgacccgcggctgctgccggcc
gacacgctggcggcgatgggccgcgcccgcgcggcgcgcgagccggggatctacgatcgc
ctggtcgatgcgacgggcggcgaggacgtcgcgatcctctgcaccacttcgggcaccacc
gcgcatcccaagctggcaatgctggccgcggggcgcgtgctgaaacattgcgcgacgtat
ctcagcttcgacccgaaggggccggacgacgaatacgtctcggtgctgccgctgccgtgg
atcatggagcaggtctacgcgctcggcaaagggctgttgtgccggatgaaagtcaatttc
gtcgaagaacccgacaccatgatgaacgacttccgcgagatcgcgccgaccttcgtgctg
ttcgcgccgcgcgtctgggaaggcatcgccgcggatgtgcgcgcgcgggtgatggacgcc
tcgccactgaaacagcggctgtacgagaccggcatgaaagcggggctcgcggcgctcgcc
gagggcaagcattcggccttcgccgacgccgtgctgttccgcgcgctgcgcgaccggctc
ggcttcacgcggctgcgctcggcggcgaccggcggcgcggcgctcggcccggatactttc
aagttcttccgcgcgatgggcgtgccgctgcgcacgctgtacggccagaccgaactgctc
ggcgcctacacgctgcacagagcggacgcggtcgatcccgacaccaccggcgtggcgatg
ggcgccgagatcgagatcaaggtcgagaaccccgatgtccagggcatcggcgagatcgtg
gtgcgccaccccaacatgtatctcggctactacaagaacgaggaagcatccaaagccgac
atgcaggacggctggatgcaatccggcgacgccggctatttcaacgcggccggccagctc
gtggtgatcgaccgcatcaaggatctcgccgagacctcgcacggcgagaaattctcgccg
caatatatcgagaacaagctgaaattctcgccctatgtggccgaagccgtggtgctcggc
gccggccgcgaccggctcgcggcgatgatctgcatccgctattcgatcatctcgaaatgg
gccgagaagaagcggatcggcttcaccacctattcggacctcgcgtcgcggcccgaggtc
tacgagatgctgcgcagcgaggtcgaatcggtcaatgcgacgctgccgccggcgcagcgg
atcgcccgcttcctgctgctctacaaggagctcgacgccgacgacggcgaactcacccgc
acccgcaaggtccgccgctcggtgatcaatgagaaatacgccgacatcatcgacggcatc
tatggcggccggagcgagatcccggtcgacacccagatccagtttcaggacggtaccacc
caacgcatccgaacgacgctgaaggtggtcgacctcgccagcggccacgcgcatgcggag
gcggcggaatga
DBGET
integrated database retrieval system
