Rhodopseudomonas palustris HaA2: RPB_1954
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Entry
RPB_1954 CDS
T00321
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00730
Thiamine metabolism
rpb01100
Metabolic pathways
rpb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RPB_1954
Enzymes [BR:
rpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RPB_1954
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABD06662
UniProt:
Q2IYP8
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All DBs
Position
complement(2220611..2222551)
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AA seq
646 aa
AA seq
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MNIRSNPDTTRPAVTTGGLPSSRKIYAVPATAPDLRVPLREIMLSEGAGEPNLPVYDTSG
PYTDPGVTIDVNKGLSRARTEWVKQRGGVEQYEGRDIKPEDNGNVGAAHAAKSFTAHHQP
LRGVGDAPITQYEFARKGIITKEMIYVAERENLGRKQQLERAEAALADGESFGAAVPAFI
TPEFVRDEIARGRAIIPANINHGELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYKDT
LIEQAEQGVDYFTIHAGVRLQYIHLTADRVTGIVSRGGSIMAKWCLAHHQESFLYTHFDE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWAKGCQVMIEGPGHV
PLHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKTGVITYKIAAHAADLGKGHPAAQLRDDALSRARFDFRWQDQFNLGLD
PDTAKAFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALNLAGAG
SFGSVGMTMSGVIEDGMAQMSEKFRDMGEKLYLDAEKVKESNKALS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccgctccaatcccgacaccacgcgtcccgccgtcaccaccggcggcctgccc
tcctcgcgcaagatctatgctgtgcccgccaccgcgccggatctgcgcgtgccgctgcgc
gagatcatgctgagcgaaggcgccggcgagccgaacctgccggtgtacgacacctcgggc
ccctacaccgatcccggcgtcaccatcgacgtcaacaagggcctgtcgcgcgcccgcacg
gagtgggtcaagcagcgcggcggcgtcgagcaatatgaaggccgcgacatcaagccggaa
gacaacggcaatgtcggcgcagcccatgcggcgaagtcgttcaccgcgcatcaccagccg
ctgcgcggcgtcggcgacgcgccgatcacgcaatacgaattcgcccgcaaggggatcatc
accaaggagatgatctacgtcgccgagcgcgagaatctcggccgcaagcagcaactggag
cgcgccgaagccgcgctggccgacggtgaaagcttcggcgccgcggtgccggcgttcatc
accccggaattcgtccgcgacgagatcgcgcgcggccgcgccatcatcccggccaacatc
aatcacggcgaactcgagccgatgatcatcggccgcaacttcctcaccaagatcaacgcc
aacatcggcaactcggcggtgacctcgtcggtcgaggaggaagtcgacaagatggtgtgg
gcgatccgctggggcgccgacaccgtgatggacctctccaccggccgcaacatccacacc
acccgcgaatggattttgcgcaactcgccggtcccgatcggcaccgtaccgatctatcag
gcgctggagaagtgcgacggcgatccggtcaagctcacctgggagctgtacaaggacacg
ctgatcgagcaggccgaacagggcgtcgattacttcacgatccacgccggcgtgcggctg
caatacatccacctcaccgccgatcgcgtcacgggcatcgtttcccgtggcggatcgatc
atggcgaagtggtgcctggcgcatcaccaggagagcttcctctacacgcatttcgacgag
atctgcgacctgatgcggaaatacgacgtgtcgttctcattgggcgacgggctgcgcccg
ggctcgatcgccgacgccaacgaccgcgcgcaattcgccgaactggagacgctcggcgaa
ctcaccaagatcgcctgggccaagggctgccaggtgatgatcgaaggccccggccacgtg
ccgctgcacaagatcaagatcaacatggacaagcagctcaaggaatgcggcgaggcgccg
ttctatacgctcggcccgctgaccaccgacatcgcgccgggctatgatcacatcacctcc
ggcattggcgccgcgatgatcggctggttcggctgcgcgatgctgtgctacgtcacgccg
aaggaacatctcggcctgcccgaccgcaacgacgtcaagaccggcgtgatcacctacaag
atcgccgcccacgccgccgacctcggcaagggccaccccgcagcccagttgcgcgacgac
gcgctgtcccgcgcccgcttcgacttccgctggcaggaccaattcaacctcggcctcgac
ccggatacggcgaaagccttccacgacgaaaccctgcccaaggaagcccacaaggtcgcg
catttctgctcgatgtgcggcccgaaattctgctcgatgaagatcacgcaagatgtgcgc
gactacgcggcgggattgggcgacaacgagaaggcggcgctgaacctcgccggcgccggc
tcgttcggcagcgtcggcatgacgatgtccggcgtcatcgaagacggcatggcgcagatg
agcgagaagtttcgggatatgggggagaagctgtatctcgatgcggagaaggtgaaggag
agcaacaaggcgctgtcgtag
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