Rhodopseudomonas palustris HaA2: RPB_2001
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Entry
RPB_2001 CDS
T00321
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00470
D-Amino acid metabolism
rpb00550
Peptidoglycan biosynthesis
rpb01100
Metabolic pathways
rpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPB_2001
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPB_2001
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPB_2001
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
RPB_2001
Enzymes [BR:
rpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RPB_2001
Peptidoglycan biosynthesis and degradation proteins [BR:
rpb01011
]
Precursor biosynthesis
Amino acid ligase
RPB_2001
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ABD06709
UniProt:
Q2IYK1
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All DBs
Position
2273447..2274436
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AA seq
329 aa
AA seq
DB search
MRQTILFGGTSKERLVSVASAQALHAALPDAELWFWNDDDSVHAVTAEALLAHARPFEEA
FRPAGENIGPLERALDRAAIEQRLLVLGLHGGVAENGELQAMCEMRGVPFTGSGAAASHL
AFDKVAAKRFAAIAGVRAPAGIALAEAEAALAAHGRLIAKPARDGSSYGLFFINAKQDLV
AVRDAARSEDYLIEPFVSGIEATCGVLEQADGSLLALPPIEIVPADGGFDYTAKYLAKST
QEICPGRFAPQISARIMEDAVKAHRVMGCRGYSRSDFIVVADGPIFLETNTLPGLTKASL
YPKALQAQGIAFVDFLHGQIALAERGARR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagacaattctcttcggcggcaccagcaaggagcgcctggtttcggtcgcctcg
gcgcaggcgctgcacgccgcgctgcccgatgccgaattgtggttctggaacgacgacgac
agcgtccacgcggtgaccgcggaggcgctgctggcgcatgcgcggccgttcgaggaggcg
tttcggccggctggcgaaaacatcggtccgctggagcgcgcgctcgatcgcgcggcgatc
gaacagcggctgctggtgctgggtctgcacggcggtgtcgccgagaacggcgagttgcag
gcgatgtgcgagatgcgcggcgtgccgttcaccgggtcgggcgcggcggcgtcgcatctc
gccttcgacaaggtggccgccaagcggttcgccgcgatcgccggcgtgcgcgcgccggcc
ggcatcgcgctggcggaggccgaggcggcgctggccgcccacggccggctgatcgccaag
ccggcccgcgacgggtcgagctacggcctgttcttcatcaatgcgaagcaggacctggtc
gcggtgcgcgacgcggcgaggtccgaggactatctgatcgagccgttcgtctccggcatc
gaagcgacctgcggcgtgctggagcaggccgacggctcgctgctggcgctgccgccgatc
gagatcgtgccggccgacggcggcttcgactacaccgcgaaatatctcgccaaatcgacc
caggagatctgccccggccggttcgcgccgcagatctcggcgaggatcatggaggatgcc
gtgaaggcgcatcgggtgatgggctgccgcggctattcgcgctccgacttcatcgtcgtc
gccgacggtccgatctttctcgagaccaatacgctgcccggactgaccaaggcctcgctc
tatcccaaggcgctgcaggcgcaggggatcgccttcgtcgatttcctccacggccagatc
gcgctcgccgaacgcggcgcccggcgttaa
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