Rhodopseudomonas palustris HaA2: RPB_2023
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Entry
RPB_2023 CDS
T00321
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03420
Nucleotide excision repair
rpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPB_2023
03430 Mismatch repair
RPB_2023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2023
Enzymes [BR:
rpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPB_2023
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPB_2023
MMR (mismatch excision repair)
Other MMR factors
RPB_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DUF3482
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABD06731
UniProt:
Q2IYH9
LinkDB
All DBs
Position
complement(2299877..2302414)
Genome browser
AA seq
845 aa
AA seq
DB search
MTEPNKRANPDLSGYQPAAGGIAARARASAAPAYLSGLNPEQREAVETLDGPVLVLAGAG
TGKTRVLTTRIAHILSTGRARPAEILSVTFTNKAAREMKLRLGQMLGQAVEGMPWLGTFH
SIGGRILRYHAELVQLTSNFTVLDTDDQIRLLKQLLAADNIDDKRWPARMLAGLIDGWKN
RGLTPSQVPAGEAASFGNGRGGKLYAAYQERLKVLNAADFGDLLLENIRLFREHPDVLRQ
YQSRFKFILVDEYQDTNVAQYLWLRLLSQAPSSSSSSLPGLTRQSIISQEDGSPGRDASR
RPGDDDRTSGDVAAPSSPPKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLER
NYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDGEMVTVTGAWDSEEEARGIGEEIEQLQ
RQGHKLNEIAILVRASFQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSP
ADDLAFERIVNVPKRGLGDATVQLLHDHARKRRIPLFEASRLVVETDELKPKARSSLRGL
IENFERWQVQRNALSHTELAEIVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFEN
LQGFLEHISLVMDRDGAADEDAVSVMTLHSAKGLEFETVFLPGWEEGLFPHQRALDDQGR
AGLEEERRLAHVGITRARRRAKLYFATNRRIHGTWNTTIPSRFLDELPQANVEITESKGG
SGWGGMSGYGPSRFDNVESFGSSYSTPGWQRAQAQRKNGGGRSGGGGFSESGASYSSSPR
RAPFTIEGELVAKSTGTDSDFTVSDRVFHQKFGYGQVTKIDGNKLTIAFDKAGEKKVVDS
FVQRV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccgaacaagcgcgccaatcccgacctctccggctatcagcccgccgccggc
ggcatcgccgcgcgggcgcgcgcctccgcggcgccggcctatctgtcggggctcaatccg
gagcagcgcgaggcggtcgagacgctggacggcccggtgctggtgctggccggcgcgggc
accggcaagacccgggtgctgacgacgcggatcgcccacatcctctccaccggccgcgcc
cgccccgccgagatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatgaagctg
cggctggggcagatgctcggccaggcggtcgagggcatgccgtggctcggcaccttccat
tccatcggcggccgcatcctgcgctatcacgccgaactggtgcagctcacctcgaacttc
accgtgctcgacaccgacgaccagataaggctgctgaagcagctcctcgccgccgacaat
atcgacgacaagcgctggccggcgcggatgctggccgggctgatcgacggctggaagaac
cgcggcctgacgccgtcgcaggtgcccgccggcgaagccgcgagcttcggcaacggccgc
ggcggcaagctctacgccgcctatcaggagcggctgaaagtgctgaacgccgccgatttc
ggcgatctgctgctggagaacataaggctgttccgcgagcaccccgacgtgctgcggcaa
tatcaaagccgcttcaagttcatcctggtcgacgagtatcaggacacgaacgtcgcgcag
tatctctggctgcggctgctgtcgcaggcgccgtcgtcctcctcgtcgtcattgccgggc
ttgacccggcaatccatcatttctcaagaagatggatcaccgggtcgcgacgcttcgcgt
cggcccggtgatgacgacagaacaagcggcgatgtcgctgcgccttcctcgccccccaaa
aacatctgctgcgtcggcgacgacgatcagtcgatctatggctggcgcggtgccgaggtc
gacaacatcctgcgcttcgaccacgatttccccggcgccaaggtcattcgcctcgaacgc
aattatcgctcgaccggccacatcctcgccgccgcctcgcatctgatcgcccataacgaa
ggccggctcggcaagacgctgcgcaccgaggacgtcgacggcgagatggtcaccgtcacc
ggcgcgtgggactccgaggaagaagcccgaggcatcggcgaggagatcgagcagctgcag
cgccagggccacaagctcaacgagatcgccatcctggtgcgcgcctcgttccagatgcgc
gaattcgaagaccgcttcgtcaccctcggcctgccctatcgcgtcatcggcggtccgcgg
ttctacgagcgcgccgaaatccgcgacgcgctggcgtatctgcgcgtgatcaattcgccg
gccgacgatctcgccttcgagcgcatcgtcaacgtgccgaagcgcggcctcggcgacgcc
accgtgcagctcttgcacgaccacgcccgcaagcgccgcattccgctgttcgaagcgtcg
cggctggtggtcgagaccgacgagctgaagccgaaggcgcgcagttcgctgcgcgggctg
atcgagaatttcgagcgctggcaggtgcagcgcaacgcgctgtcgcataccgaactcgcc
gagatcgtgctcgacgagagcggctacaccgagatgtggcagaaggaccgctccgccgac
gccgccggccggctggagaacctgaaggaactcgtccgctcgatggaggagttcgagaac
ctgcaaggatttctcgaacacatctcgctggtgatggaccgcgacggcgccgccgacgag
gacgccgtcagcgtgatgacgctgcattccgccaagggcctggaattcgagacggtgttc
ctgcccggctgggaggaaggcctgtttccacatcagcgcgcgctcgacgatcagggccgc
gccgggctggaagaagaacgccgcctcgcccatgtcggcattacgcgggcgaggcgccgg
gcgaagttgtacttcgccaccaaccgccgcatccacggcacctggaacaccacgatcccg
tcgcgctttctcgacgaactgccgcaggccaatgtcgagatcaccgagtcgaaaggcggc
tccggctggggcggcatgagcggctacggcccgtcgcgcttcgacaatgtcgaatcgttc
ggctccagctactcgacgccgggctggcagcgcgcccaggcgcaacgtaaaaacggcggc
ggccgcagcggcggcggcggtttcagcgaaagcggcgcgtcctactcatccagcccccgc
cgcgccccgttcaccatcgaaggcgaactggtcgccaaatccaccggcaccgactccgac
ttcaccgtcagcgaccgggtgtttcatcaaaagttcggctacggccaagtgacgaaaatc
gacggcaacaagctcaccatcgccttcgacaaggccggcgaaaagaaggtggtcgatagt
ttcgtgcagcgggtgtag
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