KEGG   Rhodopseudomonas palustris HaA2: RPB_2078
Entry
RPB_2078          CDS       T00321                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rpb  Rhodopseudomonas palustris HaA2
Pathway
rpb00300  Lysine biosynthesis
rpb00470  D-Amino acid metabolism
rpb01100  Metabolic pathways
rpb01110  Biosynthesis of secondary metabolites
rpb01120  Microbial metabolism in diverse environments
rpb01230  Biosynthesis of amino acids
Module
rpb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rpb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RPB_2078
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RPB_2078
Enzymes [BR:rpb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RPB_2078
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ABD06784
UniProt: Q2IYC6
LinkDB
Position
2361791..2363077
AA seq 428 aa
MSAPAAFDPDRVATLAARHGTPLFIYDAPAMRAAAARLQEALPPGARLFFAVKANPAPDV
IRLFAGEGLGAEVASGGELRLALACGVAPDRIVFSGPAKTAPELRCAIEACIFAVQAESV
AELDTLQALCVARGATVRVALRVNLGPGGERRGGWGGPSPFGMDTDALDEVTARAARLDR
LRIVGLHNHQASQTLDPAKLIARFDAFARVAASLGSRFDLQFVNFGGGFGAPFYADDAPL
DLAPVRACFAALAGVFGDRPLQFAAESGRYLVGPAGCYVARVVDVKRSFGVRYALLDGGI
HHVLGLSGTMRSLRRPVAVARVGARSGEPCEPTEIAGPLCTPIDRLAGAAELPCDLAAGD
LLAFANCGAYAKHASPLNFLGHDWPAELMIDGARVIVLSPQIAFGPALWQSREVLQRFRC
DGKIPTSS
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgagcgccccggccgcgttcgatcccgatcgggtcgcgacgctcgccgcgcgccacggc
acgccgctgttcatctacgacgcgccggcgatgcgcgccgccgcggcgcgattgcaggag
gcgctgccgccgggcgcgcgattgttcttcgcggtgaaggccaatcccgcgcccgatgtg
atccggctgttcgccggcgagggcctcggcgccgaagtggcgtcgggcggcgaattgcgg
ctcgcgctcgcctgcggcgtcgcgccggatcgcatcgtgttctccggcccggcgaagacc
gcgccggagctgcgctgcgcgatcgaggcctgcatcttcgcggtgcaggcggaatccgtc
gccgagctcgacacgctgcaggcgctgtgcgtcgcgcgcggcgcgacggtgcgcgtcgcc
ctgcgcgtcaatctcgggccgggcggcgaacgccgcggcggctggggcgggccttcgccg
ttcggcatggataccgacgcgctggacgaggtcacagcgcgcgccgcgcggctcgatcgt
ctgcgcattgtcggcctgcacaatcaccaggcgtcgcagacgctcgatccggcgaagctg
atcgcgcggttcgacgcctttgcgcgcgtggcggcgtcgctcgggtcgcgcttcgatctg
cagttcgtcaatttcggcggcggcttcggtgcgccgttctacgccgacgacgcgccgctc
gatctcgcgccggtccgcgcgtgtttcgccgcgctcgccggcgtgttcggcgaccggccg
ctgcagttcgccgccgaatccgggcgctatctcgtcgggcccgcgggctgctacgtcgcg
cgcgtggtcgatgtgaagcggtcgttcggcgtgcgctacgcgctgctcgacggcggcatt
catcacgtgctcggcctgtccggaacgatgcggtcgctgcgccggccggtggcggtggcg
cgggtcggcgcgcgatcgggggagccttgcgagccgaccgaaatcgccgggccgctgtgc
acgccgatcgatcgcctcgccggcgccgccgagctgccgtgcgatctcgccgccggcgac
ctgctggcgttcgccaattgcggagcctatgccaagcacgcgagcccgctgaacttcctc
ggccacgactggccggccgaactgatgatcgacggcgcgcgcgtcatcgtcctgtcgccg
caaattgcattcgggccggcgctgtggcaatcacgcgaggtactccagcgatttcgatgc
gatggcaaaatccccacgagctcctga

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