Rhodopseudomonas palustris HaA2: RPB_2254
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Entry
RPB_2254 CDS
T00321
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00500
Starch and sucrose metabolism
rpb01100
Metabolic pathways
rpb01110
Biosynthesis of secondary metabolites
Module
rpb_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RPB_2254
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RPB_2254
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GlgX_C
hDGE_amylase
DUF3459
Motif
Other DBs
NCBI-ProteinID:
ABD06959
UniProt:
Q2IXV1
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All DBs
Position
complement(2600267..2602468)
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AA seq
733 aa
AA seq
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MTTDTLDPPPPTTAATAESKQPPKPAPAYKIINETGNVREGLPYPLGACWDGEGTNFALF
SANATKVEVCLFDGDTERRIELPEYTDEVFHGYIPDIGPGTFYGYRVHGPYEPENGHRFN
PNKLLLDPYARAHAGELKWDPAVFGYQMETCDDTTFDERDSAAFVPKCVVVDPGFDWKGE
PGRKFVPWDQTIVYETHVKGFTKLHPEVPEHLRGTYAGFGSQPVVDYIAALGVTAVELLP
IHTFVNDSYLLDKKLVNYWGYNTIGFFAPDPRYAADVPNSLREFKEMVARLHDVGLAVIL
DVVYNHTAEGNELGPTLSFKGIDNASYYRLLPEQERYYINDTGTGNTVNLTHPRVIQMVT
DSLRYWAGEMHIDGFRFDLGTILAREVHGFDDQSGFLKAVNQDPMLSSVKLIAEPWDCGP
GGYQVGGFPPGWAEWNDKFRDTIRDYWRGDASVSALAPRLAASGDVFNRQGRRAWASVNF
ITAHDGFTLNDWASYNEKHNIANGEDGKDGHSDNRSWNCGAEGPTDDEAILALRERQKRN
MLATLLLAQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWVHWDHDAAAQDLLTFTKRLIE
LRRTCPTLRRSRFLQGQYDEALDVCDVTWINANGGPMQTEHWEDGNVKCFGMLLDGRAQK
TGIRRHAEDDTVLLITNAFDGVVDFNLPEVPHGSKWQLLIDTNLPDGAAGEQFACGAAYQ
VTARSVLLFGLVE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacactctcgatccgccgccgccgaccactgcggcgaccgccgaatcgaag
cagccgccgaaacccgcgccggcctacaagatcatcaacgagaccggcaacgtacgcgaa
ggcttgccctacccgctcggcgcctgctgggatggcgaaggcaccaacttcgcgctgttc
tcggcaaacgccaccaaggtcgaggtctgcctgttcgacggcgacaccgagcgccggatc
gagttgcccgagtacaccgacgaagtcttccacggctacatacctgatatcggccccggc
acgttctacggctatcgtgtgcacggcccctacgagccggagaacggtcaccgcttcaac
ccgaacaagctgctgctcgacccttacgcacgcgcgcacgccggcgagctgaagtgggac
ccggcggtgttcggctatcagatggaaacctgcgacgacaccaccttcgacgaacgcgac
tccgcggcgttcgtgccgaaatgcgtcgtcgtcgatccgggcttcgactggaagggcgag
cccggccgcaaattcgtgccgtgggatcagaccatcgtctacgaaacccacgtcaagggt
ttcaccaagctgcatccggaggtgccggaacatctgcgcggaacctatgccggcttcggc
agccagccggtggtggactacatcgccgcactcggcgtcaccgccgtcgagctgctgccg
atccacaccttcgtcaacgacagctatctgctcgacaagaagctggtgaactattggggt
tacaacaccatcggcttcttcgcgcccgatccgcgctacgcggcggacgtgccgaacagc
ctgcgcgaattcaaggagatggtggcgcggctgcacgacgtcggcctcgcggtgatcctc
gacgtcgtctacaaccacaccgccgagggcaacgaactcggcccgacgctgtcattcaaa
ggcatcgacaacgccagctactatcgcctgctgccggagcaggagcgctattacatcaac
gacaccggcaccggcaacaccgtcaacctcacgcatccgcgcgtgatccagatggtcacc
gactcgcttcgctactgggccggcgagatgcacatcgacggattccgcttcgatctcggc
accatcctggcccgcgaggttcacggcttcgacgaccagagcgggttcctcaaggcggtc
aatcaggacccgatgctgagctcggtgaagctgatcgcagaaccgtgggattgcggacca
ggcggctatcaggtcggtggatttccgcccggctgggcggaatggaacgacaagttccgt
gatacgattcgcgactactggcgcggcgacgcttcggtgtcggccctcgcgccacgtctg
gccgcctccggcgacgtgttcaatcggcagggccgccgagcctgggccagcgtcaacttc
atcacggcgcatgacggcttcacgctcaacgactgggcgagctacaacgagaagcacaac
attgccaacggcgaggacgggaaggacggtcattccgacaaccggtcgtggaattgcggc
gccgagggaccgaccgacgacgaggcgatcctcgcgctgcgcgagcgccagaagcgcaac
atgctggcgacgctgctgctggcgcaaggcaccccgatgctgctcgccggtgacgaattc
ggtcgcacccagcagggtaacaacaacgcctattgccaggacaacgagatctcctgggtg
cattgggaccacgacgcagccgcgcaggatctcctgaccttcaccaaacggttgatcgaa
ctgcggcggacctgtccgacgctgcgacgcagccgtttcctgcagggccaatacgacgag
gcgctcgacgtctgcgacgtcacctggatcaacgccaatggtggtccgatgcagaccgag
cactgggaagacggcaacgtgaaatgcttcggcatgttgctggacggccgcgcgcagaag
accggcatacgccggcacgcagaggacgacaccgtgttgctgatcaccaacgccttcgac
ggcgtggtcgacttcaacctgcccgaggttccgcacggctcgaaatggcagttgctgatc
gacaccaatcttccggacggagccgccggcgaacagttcgcatgcggagctgcgtatcag
gtgacggcgcgatcggtcctgctgttcggattggtggagtag
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