Rhodopseudomonas palustris HaA2: RPB_2319
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Entry
RPB_2319 CDS
T00321
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPB_2319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpb03021
]
RPB_2319
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2319
Enzymes [BR:
rpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPB_2319
Transcription machinery [BR:
rpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPB_2319
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPB_2319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
ABD07024
UniProt:
Q2IXN6
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All DBs
Position
2667312..2668331
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AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLQVTAGSDATRFATLVAEPLERGFGQTLGNALRRVLLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISLKMQGEGPKRMVVKKQGPGVVTAGDIQ
TVGDIVVLNPDLQICTLDEGAEIRMEFTVNTGKGYVAAERNRPEDAPIGLIPVDSLYSPV
RKVSYKVENTREGQILDYDKLTMTVETNGALTPDDAVAFAARILQDQLNVFVNFEEPRKE
VTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaagaattggcaagaactcattcgaccgaacaagctgcaggtgactgcc
ggcagcgatgccacccggttcgcgacgctggtcgccgagccgctcgagcgcggcttcggc
cagacactcggcaacgcgctgcggcgcgtgctgctgtcgtcgctgcagggcgcggcggtg
cagtcggtgcacatcgacggcgtgctgcacgagttctcctcgatcgccggcgtgcgcgag
gacgtcaccgacatcgtgctgaacatcaaggacatctcgctgaagatgcagggcgaaggc
ccgaagcggatggtcgtcaagaagcaggggccgggcgtcgtcaccgccggtgacatccag
accgtcggcgacatcgtcgtgctcaatccggacctgcagatctgcaccctcgacgagggc
gccgagatccgcatggaattcaccgtcaacaccggcaagggctacgtcgccgccgagcgc
aaccgtccggaagacgcgccgatcggcctgatcccggtcgacagcctgtactctccggtg
cgcaaggtgtcgtacaaggtcgagaacacccgcgagggtcagatcctcgactacgacaag
ctgaccatgacggtcgagaccaacggcgcgctgaccccggacgacgcggtcgccttcgcc
gcccgcatcctgcaggaccagctcaacgtcttcgtcaacttcgaagagccgcgcaaggaa
gtcacccaggagatcatcccggatctggccttcaacccggccttcctcaagaaggtggac
gaactcgaactgtcggtgcgttcggcgaactgcctgaagaacgacaacatcgtctacatc
ggcgacctggtgcagaagtcggaagccgaaatgctccgcaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagtgctggcgcagatgggcctgcatctcggcatggaagtg
ccgggctggccgccggagaacatcgacgagctcgccaagcgcttcgaagatcactactga
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