Rhodopseudomonas palustris HaA2: RPB_2364
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Entry
RPB_2364 CDS
T00321
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2364
Enzymes [BR:
rpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RPB_2364
DNA repair and recombination proteins [BR:
rpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RPB_2364
Prokaryotic type
RPB_2364
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
ABD07069
UniProt:
Q2IXJ1
LinkDB
All DBs
Position
complement(2718807..2720270)
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AA seq
487 aa
AA seq
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MSNDIPRPVIVWFRDDLRLSDHPALHAAAASGSPLICIYVHDEQSPQLRPPQARPIGGAA
RWWLAQSLRALAAELEQRGARLILRRGPAAAIVGELARQVDAAAVHWNEIEIAPHRAIAD
DLAETLSMSGIDHHRHPGDLLVAPSEIRTKDGRGLRVFTPFWRRVLGLGDPPKPLPAPAM
LRAGPDIASDDPATWQLEPTAPDWAGGLRASWTPGERAAHDLLTAFLDRLPGYAADRDRP
DRDATSLLSPHLRFGEISPRQLWYAARFAAAKRPAIAADIDKFLSELGWREFCRHLLHDH
PDLAERNLQSAFDAFPWTRDDAALAAWQRGRTGYPIVDAGMRQLWHTGVMHNRIRMVVAS
FLVKHLLIDWRLGEEWFWDTLVDADPGSNPGNWQWVAGSGADAAPYFRVFNPILQGEKFD
PAGDYVRRWVPEIAALPNKFIHQPWTATLLERAAAGVALGGNYPAPIVDHKVGRARALAA
YAELRQS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacattccccgccccgtcatcgtctggttccgcgacgatctgcggctctcc
gaccatccggccctgcacgcagctgcggcctccggcagcccgctgatctgcatctacgtc
catgacgaacaaagcccgcaactgcgtccgccgcaggcgcggccgatcggcggcgccgcg
cgctggtggttggcgcagtcgttgcgcgcgctcgccgccgagctcgagcagcgtggcgcg
cgactgatcctgcgccgcggccctgccgctgcgatcgtcggtgaactcgcccgacaggtc
gacgccgccgccgtgcattggaacgagatcgagatcgcaccgcatcgcgccatcgccgac
gacctcgccgaaacgctgagcatgtccgggatcgatcaccaccgccaccccggcgacctg
ttggtggccccgtccgaaatccgaaccaaggacggccgcggcctgcgcgtgttcacgccg
ttctggcgccgcgtcctcggcctcggcgatccaccgaagccgttgccggcgccggcgatg
ctgcgcgctggacccgacattgcaagcgacgatccggcgacgtggcagctggagccgacc
gcgccggattgggccggtggactgcgcgcgagctggacgccgggggaacgcgccgcgcac
gacctgctcaccgccttcctcgatcgcctgcccggctatgccgcggaccgcgaccggccc
gatcgcgacgccacctcgctgctgtcgccgcatctgcggttcggcgagatcagtccgcgg
cagctctggtacgcggcgcgctttgccgccgcaaagcggccggcgatcgccgccgacatc
gacaaattcctcagcgaactcggctggcgcgagttctgccggcaccttctgcacgaccac
cccgatctcgccgagcgcaatctgcaatcggcgttcgacgcctttccgtggacgcgcgac
gatgcggcgctcgccgcctggcagcgcggacgcaccggctatccgatcgtcgacgccggg
atgcgccaactctggcacaccggcgtgatgcacaatcgcatccgtatggtggtggcctcg
ttcctggtgaagcatctgctgatcgactggcggctcggcgaagaatggttctgggacacg
ctggtcgacgccgatcccggcagcaatcccggcaattggcagtgggtcgccggctccggc
gccgacgccgcgccgtattttcgcgtcttcaacccgatcctgcagggcgagaagttcgat
cccgccggcgattatgtgcgccgctgggtgccggagatcgcggccctgccgaacaagttc
atccaccagccatggaccgcgacgctgctcgaacgcgccgcggcgggcgttgcgctcggc
ggcaattaccccgcgccgatcgtggatcacaaggtcggacgcgcgcgcgcgcttgccgct
tacgccgaactgcgtcagagttga
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