Rhodopseudomonas palustris HaA2: RPB_2419
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Entry
RPB_2419 CDS
T00321
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpb03032
]
RPB_2419
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2419
Enzymes [BR:
rpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RPB_2419
DNA replication proteins [BR:
rpb03032
]
Prokaryotic type
DNA Topoisomerases
RPB_2419
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPB_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABD07124
UniProt:
Q2IXD6
LinkDB
All DBs
Position
complement(2772217..2774952)
Genome browser
AA seq
911 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFQMIWEIDPKAAG
RLNDIAKALKGADKLILATDPDREGEAISWHVLEVLKQKRALKDQKVERVVFNAITKQSV
TEAMQHPREIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EMEIEKFVAREYWSLIATLTTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKQAIETA
NFNVSSVEAKPARRNPYAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIAEDYGSAYVPDSPRQYQAKAKNAQEAHEAIRPTDLSR
RPSEVNKRLDSDQARLYELIWVRTVASQMESAEMERTTVDIEAKAGSRVLELRATGQVVK
FDGFLAAYQEGRDDDSEDEDSRRLPAMSENEALKREALAVTQHFTEPPPRFSEASLVKRM
EELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVIAFLESFFARYVEYDFTAAL
EEKLDRISNNEISWQQVLRDFWTDFIGAVNDIKELRVAQVLDVLDEMLGPHIYAPREDGG
DPRQCPSCGTGRLNLKAGKFGAFVGCSNYPECRHTRPLAADGGGADADRVLGLDPDTGFE
VAVKSGRFGPYIQLGDAKDYAEGEKPKRAGIPKGTSPSDVELDVALRLLALPREVGKHPE
TGEPIKAGIGRFGPYVQHEKTYASLEAGDDVHNIGLNRAVTLIAEKIAKGPSKRRFGADP
GKPLGDHPSLGPVAVKAGRYGAYVTAGGVNATIPNDKTQDTITLPEAIALIDERAAKGGG
AKAKKKAPAKKAAAKSDAKPAKKAAAKKPKAEGAAASPARAPVKAKTSTTKPKAAAAKPK
SPAKKSAAKNG
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgtcattgtcgagtcgcctgcgaaggccaagacgatcaacaaatatctgggc
tcgtcctacgaggttctggcctcgttcgggcatgtgcgcgacctgccggccaagaatggc
tcggtcgatcccgacgccaatttccagatgatctgggagatcgatccgaaagccgccgga
cggctcaacgacatcgccaaggcgctcaagggcgccgacaagctgatcctcgccaccgac
cctgatcgcgagggcgaggcgatctcctggcacgtgctggaggtgctcaaacaaaagcgt
gcgctgaaggaccagaaggtcgagcgcgtggtgttcaacgccatcaccaagcagtccgtc
accgaggcgatgcagcatccgcgcgagatcgacggcgcgctggtcgacgcctatatggcg
cgccgggcgctggattatctggtcggcttcactctttctcctgtgctgtggcgcaagctg
ccgggcgcccgctccgccgggcgcgtgcagtcggtcgcgctgcggctggtgtgcgaccgc
gagatggagatcgagaagttcgtcgcgcgcgaatactggtcgctgatcgcgacgctgacg
acgccgcgcggcgacgccttcgaggcccgcctggtcggcgccgacggcaagaagatccag
cggctcgacatcggcaccggcgccgaggccgaggacttcaagcaggcgatcgagaccgcc
aatttcaacgtgtcgagcgtcgaggccaagcccgcccgccgcaatccctacgccccgttc
accacctcgacgctgcagcaggaagccagccgcaagctcggctttgcgccggcgcacacc
atgcggatcgcgcagcggctgtatgaaggcatcgacatcggcggcgaaaccaccggtctc
attacttatatgcgaaccgacggcgtccagatcgacccgtccgccattacgcaagcgcgc
aaggtgatcgccgaggattacggcagcgcctatgtgccggactcgccacggcaatatcag
gccaaggccaagaacgcccaggaagcgcacgaagcaatccgcccgaccgacctgtcgcgc
cgcccgtccgaggtcaacaagcggctcgattccgaccaggcccggctctacgagctgatc
tgggtccgcaccgtcgccagccagatggaatcggccgagatggagcgcaccaccgtcgac
atcgaggcgaaggccggatcgcgcgtgctggagctgcgcgccaccggccaggttgtgaag
ttcgacggcttcctcgccgcctatcaggaaggccgcgacgacgattccgaagacgaggat
tcgcgacggctgccggcgatgagcgagaacgaggcgctgaagcgcgaagcgctcgcggtg
acgcagcatttcaccgaaccgccgccgcgcttctcggaagcctcattggtgaagcggatg
gaagagctcggcatcggccggccctcgacctatgcgtcgatcctgcaggtgctgaaggat
cgcggctatgtgaagctcgaaaagaagcggctgcacggcgaggacaagggccgcgtcgtg
atcgcgttcctggagagcttcttcgcccgctatgtcgaatacgacttcaccgcggcgctg
gaagagaagctcgaccgcatctccaacaacgaaatctcctggcagcaggtgctgcgcgat
ttctggaccgacttcatcggcgcggtcaatgacatcaaggaactgcgcgtcgcgcaggtg
ctcgacgtgctcgacgagatgctcggcccgcacatctatgcaccccgcgaggacggcggc
gatccgcggcagtgcccgagctgcggcactggccggctcaacctcaaggccggcaagttc
ggcgccttcgtcggctgctcgaactatccggaatgccgccacacccgcccgcttgctgca
gatggcggcggcgccgatgccgatcgcgtgctcggcctcgatcccgacaccggcttcgaa
gtcgcggtcaaatccggccggttcggcccctatatccagctcggcgacgccaaggactac
gcggagggcgaaaagcccaagcgcgccggcatcccgaagggcacctcgccgtccgacgtc
gagctcgacgtcgcgctgcggctcctggcgctgccgcgtgaagtcggcaagcaccccgag
accggcgagccgatcaaggccggcatcggccggttcgggccctatgtgcagcacgagaag
acctacgccagcctcgaggccggcgatgacgtccacaacattgggctcaatcgcgcggtc
acgctgatcgccgagaagatcgccaagggtccgagcaagcgccggtttggcgccgatccc
ggcaagccgctcggcgatcatccgtcgctcggcccggtcgccgtcaaggccggccgctac
ggcgcctatgtcaccgccggcggcgtcaatgccacgatcccgaacgacaagacccaggac
accatcacgctccccgaagcgatcgcgctgatcgacgagcgcgccgccaagggcggtggg
gctaaggccaagaagaaggcgccggccaagaaagccgcagccaagagcgacgccaagccg
gcgaagaaagccgcggccaagaagccgaaagccgagggcgccgccgcaagcccggcgcgc
gcgccggtgaaagccaagacgtcaacgaccaagcctaaagccgcggcagccaagccgaaa
tcacccgccaaaaagagcgcggccaagaacggatag
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