Rhodopseudomonas palustris HaA2: RPB_2605
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Entry
RPB_2605 CDS
T00321
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPB_2605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2605
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RPB_2605
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPB_2605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD07308
UniProt:
Q2IWV2
LinkDB
All DBs
Position
complement(2989033..2989635)
Genome browser
AA seq
200 aa
AA seq
DB search
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGD
LLYATLIDYGFATGQFQARPDDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATI
ETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHDAGALRLYDSYHCSRYNTNTR
VLTPKMFQDVFARVRADLDA
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcccaggctcgcggagttccgccacgagcttcgggcgcgcgagcccggctggcac
aatgcgccggtgccctcgttcggcgatgccgatgccgcgctgctgatcgtcggtctcgca
cccggcgtgcaaggggccaatcggaccggccgtccgttcaccggcgactatgccggcgat
ctgctctatgcgacattgatcgactacggctttgcgacgggccaattccaggctcgcccc
gacgacgggctgcgtctcgtgggctgccggatcagcaatgcggtgcgctgcgtgccgccg
cagaacaagcccctgcccgtcgagatcaacacctgccggcgctttctggccgccacgatc
gaaaccatgccgaagctgcgcgcgatcgtgctgctcggccggatcgcgcatgattcgacg
ctgaaggccctcggccttcgggcctcacaggcaccgttcggacacggcgcggtccacgac
gccggggcgctgcggctgtacgacagctatcattgctcgcgctacaacaccaacacccgc
gtgttgacgccgaagatgtttcaagacgtgttcgcgcgggtgcgcgccgatctggacgcg
tag
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